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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
STRRILGLAIESQDAGIKTITLDEQKEQLNRIEEGLDQINKDRETEKTLTEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1nhl-a2-m4-cA 52 52 1.0000 1.0000 1.0000 5.90e-30 1nhl-a2-m2-cA_1nhl-a2-m4-cA
2 1nhl-a2-m2-cA 52 52 1.0000 1.0000 1.0000 5.90e-30 1nhl-a2-m2-cA_1nhl-a2-m4-cA
3 1div-a1-m2-cA 149 28 0.2500 0.0872 0.4643 2.6 1div-a1-m1-cA_1div-a1-m2-cA
4 1div-a1-m1-cA 149 28 0.2500 0.0872 0.4643 2.6 1div-a1-m1-cA_1div-a1-m2-cA
5 4glt-a2-m1-cD 208 22 0.1731 0.0433 0.4091 2.7 4glt-a2-m1-cC_4glt-a2-m1-cD
6 4glt-a2-m1-cC 202 22 0.1731 0.0446 0.4091 2.9 4glt-a2-m1-cC_4glt-a2-m1-cD
7 3llv-a2-m2-cA 131 48 0.3077 0.1221 0.3333 3.5 3llv-a2-m1-cA_3llv-a2-m2-cA
8 3llv-a2-m1-cA 131 48 0.3077 0.1221 0.3333 3.5 3llv-a2-m1-cA_3llv-a2-m2-cA
9 5dkx-a2-m3-cA 925 42 0.2692 0.0151 0.3333 6.7 5dkx-a2-m2-cA_5dkx-a2-m3-cA
10 5dkx-a2-m2-cA 925 42 0.2692 0.0151 0.3333 6.7 5dkx-a2-m2-cA_5dkx-a2-m3-cA

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Reference:
Jacob Schwartz et al.

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