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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
STRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERS
SGKFLRRFRLPENAKMDKVKASMENGVLTVTVPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ds2-a2-m1-cD 94 94 1.0000 1.0000 1.0000 7.07e-64 5ds2-a2-m1-cC_5ds2-a2-m1-cD
2 5ds2-a2-m1-cC 94 94 1.0000 1.0000 1.0000 7.07e-64 5ds2-a2-m1-cC_5ds2-a2-m1-cD
3 5ds1-a2-m1-cC 90 94 0.4894 0.5111 0.4894 6.23e-23 5ds1-a2-m1-cB_5ds1-a2-m1-cC
4 5ds1-a2-m1-cB 90 92 0.4787 0.5000 0.4891 8.74e-23 5ds1-a2-m1-cB_5ds1-a2-m1-cC
5 5j7n-a3-m3-cA 109 92 0.4149 0.3578 0.4239 1.56e-21 5j7n-a3-m1-cA_5j7n-a3-m3-cA
6 5j7n-a3-m1-cA 109 92 0.4149 0.3578 0.4239 1.56e-21 5j7n-a3-m1-cA_5j7n-a3-m3-cA
7 5j7n-a2-m2-cA 109 92 0.4149 0.3578 0.4239 1.56e-21 5j7n-a2-m1-cA_5j7n-a2-m2-cA
8 5j7n-a2-m1-cA 109 92 0.4149 0.3578 0.4239 1.56e-21 5j7n-a2-m1-cA_5j7n-a2-m2-cA
9 3gla-a1-m1-cA 97 92 0.4043 0.3918 0.4130 7.97e-19 3gla-a1-m1-cA_3gla-a1-m1-cB
10 3gla-a1-m1-cB 99 92 0.4043 0.3838 0.4130 8.04e-19 3gla-a1-m1-cA_3gla-a1-m1-cB
11 3w1z-a1-m4-cD 110 98 0.3830 0.3273 0.3673 7.70e-12 3w1z-a1-m4-cD_3w1z-a1-m2-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
12 3w1z-a1-m4-cA 134 98 0.3830 0.2687 0.3673 1.12e-11 3w1z-a1-m2-cA_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cA
13 3w1z-a1-m2-cA 134 98 0.3830 0.2687 0.3673 1.12e-11 3w1z-a1-m2-cA_3w1z-a1-m4-cA
14 3w1z-a1-m1-cA 134 98 0.3830 0.2687 0.3673 1.12e-11 3w1z-a1-m1-cA_3w1z-a1-m4-cB
15 3w1z-a1-m4-cC 130 98 0.3830 0.2769 0.3673 1.21e-11 3w1z-a1-m4-cC_3w1z-a1-m1-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
16 3w1z-a1-m4-cB 143 98 0.3830 0.2517 0.3673 1.44e-11 3w1z-a1-m1-cA_3w1z-a1-m4-cB, 3w1z-a1-m1-cB_3w1z-a1-m4-cB
17 3w1z-a1-m2-cB 143 98 0.3830 0.2517 0.3673 1.44e-11 3w1z-a1-m4-cD_3w1z-a1-m2-cB
18 3w1z-a1-m1-cB 143 98 0.3830 0.2517 0.3673 1.44e-11 3w1z-a1-m1-cB_3w1z-a1-m4-cB, 3w1z-a1-m4-cC_3w1z-a1-m1-cB
19 7oa6-a1-m1-cJ 116 96 0.3723 0.3017 0.3646 9.88e-08 7oa6-a1-m1-cJ_7oa6-a1-m1-cB, 7oa6-a1-m1-cJ_7oa6-a1-m1-cI
20 7oa6-a1-m1-cI 152 85 0.3511 0.2171 0.3882 3.79e-07 7oa6-a1-m1-cB_7oa6-a1-m1-cI, 7oa6-a1-m1-cJ_7oa6-a1-m1-cI
21 7oa6-a1-m1-cB 152 85 0.3511 0.2171 0.3882 3.79e-07 7oa6-a1-m1-cA_7oa6-a1-m1-cB, 7oa6-a1-m1-cB_7oa6-a1-m1-cI, 7oa6-a1-m1-cJ_7oa6-a1-m1-cB
22 7oa6-a1-m1-cA 152 85 0.3511 0.2171 0.3882 3.79e-07 7oa6-a1-m1-cA_7oa6-a1-m1-cB
23 4fei-a1-m2-cA 102 87 0.2979 0.2745 0.3218 5.49e-07 4fei-a1-m1-cA_4fei-a1-m2-cA
24 4fei-a1-m1-cA 102 87 0.2979 0.2745 0.3218 5.49e-07 4fei-a1-m1-cA_4fei-a1-m2-cA
25 3vqk-a1-m4-cD 107 92 0.3404 0.2991 0.3478 8.43e-06 3vqk-a1-m4-cB_3vqk-a1-m4-cD
26 3vqk-a1-m4-cC 107 92 0.3404 0.2991 0.3478 8.43e-06 3vqk-a1-m2-cC_3vqk-a1-m4-cC
27 3vqk-a1-m4-cB 107 92 0.3404 0.2991 0.3478 8.43e-06 3vqk-a1-m4-cB_3vqk-a1-m4-cD
28 3vqk-a1-m2-cC 107 92 0.3404 0.2991 0.3478 8.43e-06 3vqk-a1-m2-cC_3vqk-a1-m4-cC
29 6l6m-a1-m2-cD 105 82 0.2128 0.1905 0.2439 4.42e-04 6l6m-a1-m1-cC_6l6m-a1-m2-cD, 6l6m-a1-m2-cB_6l6m-a1-m2-cD
30 6l6m-a1-m2-cB 105 82 0.2128 0.1905 0.2439 4.42e-04 6l6m-a1-m2-cB_6l6m-a1-m2-cD
31 6l6m-a1-m1-cC 105 82 0.2128 0.1905 0.2439 4.42e-04 6l6m-a1-m1-cC_6l6m-a1-m2-cD
32 3n3e-a1-m1-cB 104 78 0.2553 0.2308 0.3077 6.92e-04 3n3e-a1-m1-cB_3n3e-a1-m1-cA
33 2y1y-a1-m2-cA 77 77 0.2553 0.3117 0.3117 7.68e-04 2y1y-a1-m1-cA_2y1y-a1-m2-cA
34 2y1y-a1-m1-cA 77 77 0.2553 0.3117 0.3117 7.68e-04 2y1y-a1-m1-cA_2y1y-a1-m2-cA
35 3n3e-a1-m1-cA 106 78 0.2553 0.2264 0.3077 8.17e-04 3n3e-a1-m1-cB_3n3e-a1-m1-cA
36 4eld-a1-m18-cA 117 78 0.2553 0.2051 0.3077 0.006 4eld-a1-m9-cB_4eld-a1-m18-cA
37 4i88-a1-m3-cA 113 78 0.2553 0.2124 0.3077 0.006 4i88-a1-m3-cA_4i88-a1-m3-cE
38 4i88-a1-m3-cE 114 78 0.2553 0.2105 0.3077 0.006 4i88-a1-m3-cA_4i88-a1-m3-cE
39 4i88-a1-m3-cD 114 78 0.2553 0.2105 0.3077 0.006 4i88-a1-m3-cB_4i88-a1-m3-cD
40 4i88-a1-m3-cB 114 78 0.2553 0.2105 0.3077 0.006 4i88-a1-m3-cB_4i88-a1-m3-cD
41 4eld-a1-m9-cB 114 78 0.2553 0.2105 0.3077 0.006 4eld-a1-m9-cB_4eld-a1-m18-cA
42 4rzk-a1-m1-cA 87 78 0.2234 0.2414 0.2692 0.68 4rzk-a1-m1-cA_4rzk-a1-m1-cB
43 4rzk-a1-m1-cB 87 78 0.2234 0.2414 0.2692 0.70 4rzk-a1-m1-cA_4rzk-a1-m1-cB
44 2vee-a2-m1-cD 190 63 0.1915 0.0947 0.2857 3.8 2vee-a2-m1-cB_2vee-a2-m1-cD
45 2vee-a2-m1-cB 190 63 0.1915 0.0947 0.2857 3.8 2vee-a2-m1-cB_2vee-a2-m1-cD
46 2qxy-a1-m1-cA 118 39 0.1277 0.1017 0.3077 7.8 2qxy-a1-m1-cB_2qxy-a1-m1-cA
47 2qxy-a1-m1-cB 116 39 0.1277 0.1034 0.3077 7.8 2qxy-a1-m1-cB_2qxy-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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