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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
STSTTIRVSTQTRDRLAAQARERGISMSALLTELAAQAERQAIFRAEREASHAETTTQAV
RDEDREWEGTVGDGL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6a6x-a1-m1-cC 75 75 1.0000 1.0000 1.0000 6.35e-47 6a6x-a1-m1-cD_6a6x-a1-m1-cC
2 6a6x-a1-m1-cD 54 54 0.7200 1.0000 1.0000 2.27e-30 6a6x-a1-m1-cD_6a6x-a1-m1-cC
3 6ust-a2-m1-cB 463 33 0.1467 0.0238 0.3333 1.6 6ust-a2-m1-cB_6ust-a2-m2-cC
4 6ust-a2-m2-cC 464 33 0.1467 0.0237 0.3333 1.6 6ust-a2-m1-cB_6ust-a2-m2-cC
5 3hnp-a1-m1-cD 344 63 0.2400 0.0523 0.2857 1.9 3hnp-a1-m1-cD_3hnp-a1-m1-cA
6 3hnp-a1-m1-cB 350 63 0.2400 0.0514 0.2857 1.9 3hnp-a1-m1-cC_3hnp-a1-m1-cB
7 3hnp-a1-m1-cA 350 63 0.2400 0.0514 0.2857 1.9 3hnp-a1-m1-cD_3hnp-a1-m1-cA
8 3vea-a1-m2-cB 149 48 0.2267 0.1141 0.3542 3.7 3vea-a1-m1-cB_3vea-a1-m2-cB, 3vea-a1-m2-cA_3vea-a1-m2-cB
9 3vea-a1-m2-cA 149 48 0.2267 0.1141 0.3542 3.7 3vea-a1-m2-cA_3vea-a1-m2-cB
10 3vea-a1-m1-cB 149 48 0.2267 0.1141 0.3542 3.7 3vea-a1-m1-cB_3vea-a1-m2-cB
11 3veb-a1-m2-cB 150 48 0.2267 0.1133 0.3542 4.0 3veb-a1-m1-cA_3veb-a1-m2-cB
12 3veb-a1-m1-cA 146 48 0.2267 0.1164 0.3542 4.2 3veb-a1-m1-cA_3veb-a1-m2-cB
13 3fd8-a1-m1-cB 340 60 0.2133 0.0471 0.2667 4.3 3fd8-a1-m1-cB_3fd8-a1-m1-cF
14 3fd8-a1-m1-cF 341 60 0.2133 0.0469 0.2667 4.3 3fd8-a1-m1-cB_3fd8-a1-m1-cF, 3fd8-a1-m1-cE_3fd8-a1-m1-cF
15 3fd8-a1-m1-cE 341 60 0.2133 0.0469 0.2667 4.3 3fd8-a1-m1-cE_3fd8-a1-m1-cF
16 6vh5-a2-m1-cB 280 53 0.2267 0.0607 0.3208 7.4 6vh5-a2-m1-cB_6vh5-a2-m1-cD
17 6vh5-a2-m1-cD 282 53 0.2267 0.0603 0.3208 7.8 6vh5-a2-m1-cB_6vh5-a2-m1-cD
18 4r7y-a1-m3-cB 591 40 0.2133 0.0271 0.4000 8.0 4r7y-a1-m3-cA_4r7y-a1-m3-cB
19 4r7y-a1-m3-cA 591 40 0.2133 0.0271 0.4000 8.0 4r7y-a1-m3-cA_4r7y-a1-m3-cB

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Reference:
Jacob Schwartz et al.

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