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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
SVCKGVSGNPAKGEVFLYKHVNFQGDSWKVTGNVYDFRSVSGLNDVVSSVKVGPNTKAFI
FKDDRFNGNFIRLEESSQVTDLTTRNLNDAISSIVATFE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1hdf-a1-m2-cB 99 99 1.0000 1.0000 1.0000 7.87e-69 1hdf-a1-m1-cA_1hdf-a1-m2-cB, 1hdf-a1-m2-cA_1hdf-a1-m2-cB
2 1hdf-a1-m2-cA 99 99 1.0000 1.0000 1.0000 7.87e-69 1hdf-a1-m2-cA_1hdf-a1-m2-cB
3 1hdf-a1-m1-cA 99 99 1.0000 1.0000 1.0000 7.87e-69 1hdf-a1-m1-cA_1hdf-a1-m2-cB
4 1a45-a1-m2-cA 173 74 0.2121 0.1214 0.2838 0.002 1a45-a1-m1-cA_1a45-a1-m2-cA
5 1a45-a1-m1-cA 173 74 0.2121 0.1214 0.2838 0.002 1a45-a1-m1-cA_1a45-a1-m2-cA
6 3hzb-a4-m1-cH 87 83 0.2424 0.2759 0.2892 0.005 3hzb-a4-m1-cG_3hzb-a4-m1-cH
7 3hzb-a4-m1-cG 87 83 0.2424 0.2759 0.2892 0.005 3hzb-a4-m1-cG_3hzb-a4-m1-cH
8 3enu-a1-m2-cA 114 66 0.2020 0.1754 0.3030 4.2 3enu-a1-m1-cA_3enu-a1-m2-cA
9 3enu-a1-m1-cA 114 66 0.2020 0.1754 0.3030 4.2 3enu-a1-m1-cA_3enu-a1-m2-cA
10 1xs0-a2-m1-cC 129 75 0.2121 0.1628 0.2800 7.0 1xs0-a2-m1-cB_1xs0-a2-m1-cC
11 7rwm-a2-m1-cD 354 76 0.1717 0.0480 0.2237 7.9 7rwm-a2-m1-cD_7rwm-a2-m1-cC
12 7rwm-a2-m1-cC 355 76 0.1717 0.0479 0.2237 9.1 7rwm-a2-m1-cD_7rwm-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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