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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
SVDLTVPWDDIEALLKNNFENDQAAVRQVMERLQKGWSLAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vej-a1-m1-cB 41 41 1.0000 1.0000 1.0000 1.42e-24 3vej-a1-m1-cA_3vej-a1-m1-cB
2 3vej-a1-m1-cA 40 40 0.9756 1.0000 1.0000 7.65e-24 3vej-a1-m1-cA_3vej-a1-m1-cB
3 3ea0-a1-m1-cA 237 35 0.2683 0.0464 0.3143 0.77 3ea0-a1-m1-cA_3ea0-a1-m1-cB
4 3ea0-a1-m1-cB 239 35 0.2683 0.0460 0.3143 0.78 3ea0-a1-m1-cA_3ea0-a1-m1-cB
5 4uab-a1-m1-cA 309 37 0.3415 0.0453 0.3784 0.89 4uab-a1-m1-cB_4uab-a1-m1-cA
6 4uab-a1-m1-cB 308 37 0.3415 0.0455 0.3784 0.92 4uab-a1-m1-cB_4uab-a1-m1-cA
7 7eku-a1-m1-cB 1498 26 0.2683 0.0073 0.4231 4.8 7eku-a1-m1-cB_7eku-a1-m1-cA
8 7eku-a1-m1-cA 1525 26 0.2683 0.0072 0.4231 5.0 7eku-a1-m1-cB_7eku-a1-m1-cA
9 7n7a-a1-m1-cA 269 18 0.2195 0.0335 0.5000 6.3 7n7a-a1-m1-cA_7n7a-a1-m1-cB
10 7n7a-a1-m1-cB 270 18 0.2195 0.0333 0.5000 6.3 7n7a-a1-m1-cA_7n7a-a1-m1-cB
11 1gpj-a1-m2-cA 399 31 0.3171 0.0326 0.4194 6.8 1gpj-a1-m1-cA_1gpj-a1-m2-cA
12 1gpj-a1-m1-cA 399 31 0.3171 0.0326 0.4194 6.8 1gpj-a1-m1-cA_1gpj-a1-m2-cA
13 3rfy-a2-m2-cA 356 28 0.2683 0.0309 0.3929 8.7 3rfy-a2-m1-cA_3rfy-a2-m2-cA
14 3rfy-a2-m1-cA 356 28 0.2683 0.0309 0.3929 8.7 3rfy-a2-m1-cA_3rfy-a2-m2-cA
15 3lg0-a2-m1-cC 385 13 0.2195 0.0234 0.6923 9.8 3lg0-a2-m1-cC_3lg0-a2-m1-cD
16 3lg0-a2-m1-cD 387 13 0.2195 0.0233 0.6923 9.8 3lg0-a2-m1-cC_3lg0-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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