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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
SVDSASKEEIAALIVNYFSSIVEKKEISEDGADSLNVAMDCISEAFGFEREAVSGILGKS
EFKGQHLADILNSA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2lxc-a1-m1-cC 74 74 1.0000 1.0000 1.0000 3.24e-47 2lxc-a1-m1-cB_2lxc-a1-m1-cC
2 2lxc-a1-m1-cB 74 74 1.0000 1.0000 1.0000 3.24e-47 2lxc-a1-m1-cB_2lxc-a1-m1-cC
3 3zdm-a1-m1-cD 69 69 0.9324 1.0000 1.0000 5.56e-44 3zdm-a1-m1-cA_3zdm-a1-m1-cD, 3zdm-a1-m1-cE_3zdm-a1-m1-cD
4 3zdm-a1-m1-cA 69 69 0.9324 1.0000 1.0000 5.56e-44 3zdm-a1-m1-cA_3zdm-a1-m1-cD, 3zdm-a1-m1-cE_3zdm-a1-m1-cA
5 3zdm-a1-m1-cE 50 50 0.6757 1.0000 1.0000 5.65e-29 3zdm-a1-m1-cE_3zdm-a1-m1-cA, 3zdm-a1-m1-cE_3zdm-a1-m1-cD
6 4gof-a1-m1-cB 52 45 0.1892 0.2692 0.3111 0.027 4gof-a1-m1-cA_4gof-a1-m1-cB
7 4gof-a1-m1-cA 52 45 0.1892 0.2692 0.3111 0.027 4gof-a1-m1-cA_4gof-a1-m1-cB
8 4cpg-a1-m1-cB 69 42 0.1757 0.1884 0.3095 0.034 4cpg-a1-m1-cA_4cpg-a1-m1-cB
9 4cpg-a1-m1-cA 69 42 0.1757 0.1884 0.3095 0.034 4cpg-a1-m1-cA_4cpg-a1-m1-cB
10 4glt-a2-m1-cD 208 27 0.1486 0.0529 0.4074 1.1 4glt-a2-m1-cC_4glt-a2-m1-cD
11 4glt-a2-m1-cC 202 27 0.1486 0.0545 0.4074 1.2 4glt-a2-m1-cC_4glt-a2-m1-cD
12 8heh-a1-m1-cB 147 34 0.1486 0.0748 0.3235 7.9 8heh-a1-m1-cA_8heh-a1-m1-cB
13 8heh-a1-m1-cA 141 34 0.1486 0.0780 0.3235 8.5 8heh-a1-m1-cA_8heh-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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