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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
SVHWSIVYRQLGNLLEQYEVEIARLKSQLVLEKKLRIQVEKEME

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4x01-a1-m1-cA 49 44 1.0000 0.8980 1.0000 5.99e-25 4x01-a1-m1-cD_4x01-a1-m1-cA
2 4x01-a1-m1-cC 50 44 1.0000 0.8800 1.0000 6.20e-25 4x01-a1-m1-cD_4x01-a1-m1-cC
3 4x01-a1-m1-cD 48 44 1.0000 0.9167 1.0000 6.47e-25 4x01-a1-m1-cD_4x01-a1-m1-cA, 4x01-a1-m1-cD_4x01-a1-m1-cC
4 4x01-a2-m1-cE 46 44 1.0000 0.9565 1.0000 8.24e-25 4x01-a2-m1-cG_4x01-a2-m1-cE
5 4x01-a2-m1-cF 47 44 1.0000 0.9362 1.0000 8.42e-25 4x01-a2-m1-cG_4x01-a2-m1-cF
6 4x01-a2-m1-cG 44 44 1.0000 1.0000 1.0000 1.02e-24 4x01-a2-m1-cG_4x01-a2-m1-cE, 4x01-a2-m1-cG_4x01-a2-m1-cF
7 4zb1-a1-m1-cB 226 13 0.1818 0.0354 0.6154 3.2 4zb1-a1-m1-cA_4zb1-a1-m1-cB
8 4zb1-a1-m1-cA 226 13 0.1818 0.0354 0.6154 3.2 4zb1-a1-m1-cA_4zb1-a1-m1-cB
9 6oy3-a1-m1-cB 594 25 0.1591 0.0118 0.2800 6.6 6oy3-a1-m1-cA_6oy3-a1-m1-cB
10 6oy3-a1-m1-cA 594 25 0.1591 0.0118 0.2800 6.6 6oy3-a1-m1-cA_6oy3-a1-m1-cB
11 2cxi-a1-m1-cC 339 16 0.2273 0.0295 0.6250 6.9 2cxi-a1-m1-cA_2cxi-a1-m1-cC, 2cxi-a1-m1-cB_2cxi-a1-m1-cC
12 2cxi-a1-m1-cB 339 16 0.2273 0.0295 0.6250 6.9 2cxi-a1-m1-cB_2cxi-a1-m1-cC
13 2cxi-a1-m1-cA 339 16 0.2273 0.0295 0.6250 6.9 2cxi-a1-m1-cA_2cxi-a1-m1-cC
14 5jhf-a1-m1-cC 404 25 0.2045 0.0223 0.3600 7.6 5jhf-a1-m1-cC_5jhf-a1-m1-cF
15 5jhf-a1-m1-cF 405 25 0.2045 0.0222 0.3600 7.7 5jhf-a1-m1-cC_5jhf-a1-m1-cF
16 6so3-a1-m1-cB 840 36 0.2727 0.0143 0.3333 9.1 6so3-a1-m1-cA_6so3-a1-m1-cB
17 6so3-a1-m1-cA 840 36 0.2727 0.0143 0.3333 9.1 6so3-a1-m1-cA_6so3-a1-m1-cB
18 3jbh-a1-m8-cH 964 36 0.2727 0.0124 0.3333 9.7 3jbh-a1-m8-cG_3jbh-a1-m8-cH
19 3jbh-a1-m8-cG 962 36 0.2727 0.0125 0.3333 9.9 3jbh-a1-m8-cG_3jbh-a1-m8-cH

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Reference:
Jacob Schwartz et al.

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