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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
SVHWSIVYRQLGNLLEQYEVEIARLKSQLVLEKKLRIQVEKEMESVKTK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4x01-a1-m1-cC 50 49 1.0000 0.9800 1.0000 2.12e-28 4x01-a1-m1-cD_4x01-a1-m1-cC
2 4x01-a1-m1-cA 49 49 1.0000 1.0000 1.0000 2.19e-28 4x01-a1-m1-cD_4x01-a1-m1-cA
3 4x01-a1-m1-cD 48 48 0.9796 1.0000 1.0000 8.64e-28 4x01-a1-m1-cD_4x01-a1-m1-cA, 4x01-a1-m1-cD_4x01-a1-m1-cC
4 4x01-a2-m1-cF 47 47 0.9592 1.0000 1.0000 7.69e-27 4x01-a2-m1-cG_4x01-a2-m1-cF
5 4x01-a2-m1-cE 46 46 0.9388 1.0000 1.0000 3.74e-26 4x01-a2-m1-cG_4x01-a2-m1-cE
6 4x01-a2-m1-cG 44 44 0.8980 1.0000 1.0000 6.67e-25 4x01-a2-m1-cG_4x01-a2-m1-cE, 4x01-a2-m1-cG_4x01-a2-m1-cF
7 4zb1-a1-m1-cB 226 13 0.1633 0.0354 0.6154 4.0 4zb1-a1-m1-cA_4zb1-a1-m1-cB
8 4zb1-a1-m1-cA 226 13 0.1633 0.0354 0.6154 4.0 4zb1-a1-m1-cA_4zb1-a1-m1-cB
9 6oy3-a1-m1-cB 594 25 0.1429 0.0118 0.2800 6.4 6oy3-a1-m1-cA_6oy3-a1-m1-cB
10 6oy3-a1-m1-cA 594 25 0.1429 0.0118 0.2800 6.4 6oy3-a1-m1-cA_6oy3-a1-m1-cB
11 2cxi-a1-m1-cC 339 16 0.2041 0.0295 0.6250 8.0 2cxi-a1-m1-cA_2cxi-a1-m1-cC, 2cxi-a1-m1-cB_2cxi-a1-m1-cC
12 2cxi-a1-m1-cB 339 16 0.2041 0.0295 0.6250 8.0 2cxi-a1-m1-cB_2cxi-a1-m1-cC
13 2cxi-a1-m1-cA 339 16 0.2041 0.0295 0.6250 8.0 2cxi-a1-m1-cA_2cxi-a1-m1-cC
14 8egs-a1-m6-cY 586 37 0.2653 0.0222 0.3514 9.6 8egs-a1-m5-cY_8egs-a1-m6-cY
15 8egs-a1-m5-cY 586 37 0.2653 0.0222 0.3514 9.6 8egs-a1-m5-cY_8egs-a1-m6-cY

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Reference:
Jacob Schwartz et al.

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