Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=35)
SVIRFFDVTGLSEKDIERVKEEIELLKIRNEYMKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8bny-a1-m1-cC 35 35 1.0000 1.0000 1.0000 2.41e-18 8bny-a1-m1-cC_8bny-a1-m1-cD
2 8bny-a1-m1-cD 36 35 1.0000 0.9722 1.0000 2.53e-18 8bny-a1-m1-cA_8bny-a1-m1-cD, 8bny-a1-m1-cC_8bny-a1-m1-cD
3 8bny-a1-m1-cA 35 34 0.9714 0.9714 1.0000 1.40e-17 8bny-a1-m1-cA_8bny-a1-m1-cD
4 6zur-a1-m1-cB 398 28 0.2857 0.0251 0.3571 1.4 6zur-a1-m1-cA_6zur-a1-m1-cB
5 6zur-a1-m1-cA 398 28 0.2857 0.0251 0.3571 1.4 6zur-a1-m1-cA_6zur-a1-m1-cB
6 5gox-a1-m1-cB 178 23 0.3429 0.0674 0.5217 1.9 5gox-a1-m1-cA_5gox-a1-m1-cB
7 5gox-a1-m1-cA 178 23 0.3429 0.0674 0.5217 1.9 5gox-a1-m1-cA_5gox-a1-m1-cB
8 4w4t-a1-m1-cB 380 17 0.2571 0.0237 0.5294 2.2 4w4t-a1-m1-cB_4w4t-a1-m1-cA
9 4w4t-a1-m1-cA 381 17 0.2571 0.0236 0.5294 2.2 4w4t-a1-m1-cB_4w4t-a1-m1-cA
10 4ofm-a2-m1-cD 206 28 0.3143 0.0534 0.3929 2.6 4ofm-a2-m1-cC_4ofm-a2-m1-cD
11 4ofm-a2-m1-cC 206 28 0.3143 0.0534 0.3929 2.6 4ofm-a2-m1-cC_4ofm-a2-m1-cD
12 7bbn-a1-m1-cB 366 23 0.2857 0.0273 0.4348 3.3 7bbn-a1-m1-cA_7bbn-a1-m1-cB
13 7bbn-a1-m1-cA 361 23 0.2857 0.0277 0.4348 3.3 7bbn-a1-m1-cA_7bbn-a1-m1-cB
14 1efu-a1-m1-cC 363 22 0.2857 0.0275 0.4545 7.4 1efu-a1-m1-cA_1efu-a1-m1-cC
15 1efu-a1-m1-cA 363 22 0.2857 0.0275 0.4545 7.4 1efu-a1-m1-cA_1efu-a1-m1-cC
16 1dg1-a1-m1-cH 385 22 0.2857 0.0260 0.4545 7.6 1dg1-a1-m1-cG_1dg1-a1-m1-cH
17 1dg1-a1-m1-cG 385 22 0.2857 0.0260 0.4545 7.6 1dg1-a1-m1-cG_1dg1-a1-m1-cH
18 3agp-a2-m2-cA 1202 22 0.2857 0.0083 0.4545 8.0 3agp-a2-m1-cA_3agp-a2-m2-cA
19 3agp-a2-m1-cA 1202 22 0.2857 0.0083 0.4545 8.0 3agp-a2-m1-cA_3agp-a2-m2-cA
20 4kmd-a2-m2-cA 367 22 0.2571 0.0245 0.4091 8.3 4kmd-a2-m1-cA_4kmd-a2-m2-cA
21 4kmd-a2-m1-cA 367 22 0.2571 0.0245 0.4091 8.3 4kmd-a2-m1-cA_4kmd-a2-m2-cA
22 5afi-a1-m1-cz 371 22 0.2857 0.0270 0.4545 9.1 5afi-a1-m1-cy_5afi-a1-m1-cz
23 2hdn-a9-m1-cH 335 22 0.2857 0.0299 0.4545 10.0 2hdn-a9-m1-cF_2hdn-a9-m1-cH
24 2hdn-a9-m1-cF 335 22 0.2857 0.0299 0.4545 10.0 2hdn-a9-m1-cF_2hdn-a9-m1-cH

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600