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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
SVKLEMEMVTQQYEKAKAIQDEQLERLTQICQEQGFEIRQLRAHLAQQDLDLAAEREAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7wjt-a2-m1-cC 59 59 1.0000 1.0000 1.0000 6.34e-36 7wjt-a2-m1-cD_7wjt-a2-m1-cC
2 7wjt-a2-m1-cD 56 55 0.9322 0.9821 1.0000 3.67e-33 7wjt-a2-m1-cD_7wjt-a2-m1-cC
3 2glf-a1-m3-cD 437 34 0.1864 0.0252 0.3235 2.0 2glf-a1-m3-cA_2glf-a1-m3-cD, 2glf-a1-m3-cC_2glf-a1-m3-cD
4 2glf-a1-m3-cC 437 34 0.1864 0.0252 0.3235 2.0 2glf-a1-m3-cC_2glf-a1-m3-cD
5 2glf-a1-m3-cA 437 34 0.1864 0.0252 0.3235 2.0 2glf-a1-m3-cA_2glf-a1-m3-cD
6 3hur-a1-m4-cA 384 24 0.1864 0.0286 0.4583 3.6 3hur-a1-m1-cA_3hur-a1-m4-cA, 3hur-a1-m2-cA_3hur-a1-m4-cA, 3hur-a1-m3-cA_3hur-a1-m4-cA
7 3hur-a1-m3-cA 384 24 0.1864 0.0286 0.4583 3.6 3hur-a1-m3-cA_3hur-a1-m4-cA
8 3hur-a1-m2-cA 384 24 0.1864 0.0286 0.4583 3.6 3hur-a1-m2-cA_3hur-a1-m4-cA
9 3hur-a1-m1-cA 384 24 0.1864 0.0286 0.4583 3.6 3hur-a1-m1-cA_3hur-a1-m4-cA
10 3bvp-a1-m2-cA 136 30 0.1864 0.0809 0.3667 8.9 3bvp-a1-m2-cB_3bvp-a1-m2-cA
11 3bvp-a1-m1-cA 136 30 0.1864 0.0809 0.3667 8.9 3bvp-a1-m2-cB_3bvp-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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