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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
SVNSVTLVGVVHDIQSGFVYEDAVTQFTLTTTSIEKDHHTIRCFGELFSAEVKQKVKEGN
VVCVNGRLRLSPQLEPSYFPYIQVQPPHGQVAVIHGDR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3k7u-a1-m2-cC 98 98 1.0000 1.0000 1.0000 2.39e-69 3k7u-a1-m1-cC_3k7u-a1-m2-cC
2 3k7u-a1-m1-cC 98 98 1.0000 1.0000 1.0000 2.39e-69 3k7u-a1-m1-cC_3k7u-a1-m2-cC
3 3k80-a1-m1-cD 101 102 0.9490 0.9208 0.9118 4.56e-60 3k80-a1-m1-cD_3k80-a1-m1-cC
4 3k80-a1-m1-cC 103 105 0.9388 0.8932 0.8762 2.75e-54 3k80-a1-m1-cD_3k80-a1-m1-cC
5 3stb-a1-m2-cC 111 102 0.4388 0.3874 0.4216 6.09e-20 3stb-a1-m1-cC_3stb-a1-m2-cC
6 3stb-a1-m1-cC 111 102 0.4388 0.3874 0.4216 6.09e-20 3stb-a1-m1-cC_3stb-a1-m2-cC
7 4g22-a3-m2-cB 416 41 0.1633 0.0385 0.3902 0.26 4g22-a3-m2-cB_4g22-a3-m1-cA
8 4g0b-a4-m3-cB 423 41 0.1633 0.0378 0.3902 0.26 4g0b-a4-m1-cB_4g0b-a4-m3-cB
9 4g0b-a4-m1-cB 423 41 0.1633 0.0378 0.3902 0.26 4g0b-a4-m1-cB_4g0b-a4-m3-cB
10 4g22-a3-m1-cA 417 41 0.1633 0.0384 0.3902 0.26 4g22-a3-m2-cB_4g22-a3-m1-cA
11 2hy5-a1-m2-cA 130 58 0.1837 0.1385 0.3103 2.1 2hy5-a1-m1-cA_2hy5-a1-m2-cA
12 2hy5-a1-m1-cA 130 58 0.1837 0.1385 0.3103 2.1 2hy5-a1-m1-cA_2hy5-a1-m2-cA
13 3pgz-a1-m1-cA 109 110 0.2551 0.2294 0.2273 2.9 3pgz-a1-m1-cA_3pgz-a1-m1-cB
14 3vz0-a2-m1-cD 445 40 0.1531 0.0337 0.3750 4.3 3vz0-a2-m1-cC_3vz0-a2-m1-cD
15 3vz0-a2-m1-cC 445 40 0.1531 0.0337 0.3750 4.3 3vz0-a2-m1-cC_3vz0-a2-m1-cD
16 5hgq-a2-m1-cD 470 43 0.1633 0.0340 0.3721 6.4 5hgq-a2-m1-cD_5hgq-a2-m1-cC
17 3lgj-a1-m1-cB 97 70 0.1837 0.1856 0.2571 8.9 3lgj-a1-m1-cA_3lgj-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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