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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
SVSERPPYSYMAMIQFAINSTERKRMTLKDIYTWIEDHFPYFKHIAKPGWKNSIRHNLSL
HDMFVRETSANGKVSFWTIH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7fj2-a2-m1-cF 80 80 1.0000 1.0000 1.0000 4.52e-57 7fj2-a2-m1-cE_7fj2-a2-m1-cF
2 7fj2-a2-m1-cE 79 79 0.9875 1.0000 1.0000 1.85e-56 7fj2-a2-m1-cE_7fj2-a2-m1-cF
3 7vox-a2-m1-cB 83 79 0.4625 0.4458 0.4684 2.55e-20 7vox-a2-m1-cB_7vox-a2-m1-cH
4 7vox-a2-m1-cH 85 79 0.4625 0.4353 0.4684 2.78e-20 7vox-a2-m1-cB_7vox-a2-m1-cH
5 2a07-a1-m1-cI 81 75 0.4125 0.4074 0.4400 1.11e-17 2a07-a1-m1-cH_2a07-a1-m1-cI
6 6xat-a2-m2-cA 77 75 0.4125 0.4286 0.4400 4.14e-17 6xat-a2-m1-cA_6xat-a2-m2-cA
7 6xat-a2-m1-cA 77 75 0.4125 0.4286 0.4400 4.14e-17 6xat-a2-m1-cA_6xat-a2-m2-cA
8 3qrf-a2-m1-cI 82 75 0.4250 0.4146 0.4533 4.99e-16 3qrf-a2-m1-cH_3qrf-a2-m1-cI
9 3qrf-a2-m1-cH 82 75 0.4250 0.4146 0.4533 4.99e-16 3qrf-a2-m1-cH_3qrf-a2-m1-cI
10 2a07-a1-m1-cH 79 73 0.3875 0.3924 0.4247 7.90e-16 2a07-a1-m1-cH_2a07-a1-m1-cI
11 7qwn-a3-m1-cA 410 37 0.1875 0.0366 0.4054 0.015 7qwn-a3-m1-cB_7qwn-a3-m1-cA
12 7qwn-a3-m1-cC 409 37 0.1875 0.0367 0.4054 0.015 7qwn-a3-m1-cB_7qwn-a3-m1-cC
13 7qwn-a3-m1-cB 407 37 0.1875 0.0369 0.4054 0.015 7qwn-a3-m1-cB_7qwn-a3-m1-cA, 7qwn-a3-m1-cB_7qwn-a3-m1-cC
14 6btd-a1-m4-cA 203 29 0.1625 0.0640 0.4483 3.2 6btd-a1-m2-cA_6btd-a1-m4-cA
15 6btd-a1-m2-cA 203 29 0.1625 0.0640 0.4483 3.2 6btd-a1-m2-cA_6btd-a1-m4-cA
16 6lfk-a1-m1-cD 720 26 0.1500 0.0167 0.4615 5.8 6lfk-a1-m1-cA_6lfk-a1-m1-cD, 6lfk-a1-m1-cD_6lfk-a1-m1-cB, 6lfk-a1-m1-cD_6lfk-a1-m1-cC
17 6lfk-a1-m1-cC 723 26 0.1500 0.0166 0.4615 5.8 6lfk-a1-m1-cD_6lfk-a1-m1-cC
18 6lfk-a1-m1-cA 719 26 0.1500 0.0167 0.4615 5.9 6lfk-a1-m1-cA_6lfk-a1-m1-cD
19 6lfk-a1-m1-cB 721 26 0.1500 0.0166 0.4615 5.9 6lfk-a1-m1-cD_6lfk-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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