Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
SVYKVIDIIGTSPTSWEQAAAEAVQRARDSVDDIRVARVIEQDMAVDSAGKITYRIKLEV
SFKMRPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3onr-a1-m1-cK 67 67 1.0000 1.0000 1.0000 5.97e-43 3onr-a1-m1-cD_3onr-a1-m1-cK
2 3onr-a1-m1-cD 67 67 1.0000 1.0000 1.0000 5.97e-43 3onr-a1-m1-cD_3onr-a1-m1-cK
3 3onr-a1-m1-cC 70 67 1.0000 0.9571 1.0000 6.27e-43 3onr-a1-m1-cB_3onr-a1-m1-cC
4 3onr-a1-m1-cB 70 67 1.0000 0.9571 1.0000 6.27e-43 3onr-a1-m1-cB_3onr-a1-m1-cC
5 2vxa-a1-m1-cL 66 64 0.2239 0.2273 0.2344 4.12e-05 2vxa-a1-m1-cE_2vxa-a1-m1-cL, 2vxa-a1-m1-cK_2vxa-a1-m1-cL
6 2vxa-a1-m1-cK 66 64 0.2239 0.2273 0.2344 4.12e-05 2vxa-a1-m1-cK_2vxa-a1-m1-cL
7 2vxa-a1-m1-cE 66 64 0.2239 0.2273 0.2344 4.12e-05 2vxa-a1-m1-cE_2vxa-a1-m1-cL
8 2v21-a1-m2-cF 67 64 0.3134 0.3134 0.3281 0.015 2v21-a1-m2-cB_2v21-a1-m2-cF, 2v21-a1-m2-cE_2v21-a1-m2-cF
9 2v21-a1-m2-cE 67 64 0.3134 0.3134 0.3281 0.015 2v21-a1-m2-cE_2v21-a1-m2-cF
10 2v21-a1-m2-cB 67 64 0.3134 0.3134 0.3281 0.015 2v21-a1-m2-cB_2v21-a1-m2-cF
11 2yiz-a1-m3-cD 68 25 0.1642 0.1618 0.4400 2.4 2yiz-a1-m2-cC_2yiz-a1-m3-cD, 2yiz-a1-m3-cB_2yiz-a1-m3-cD
12 2yiz-a1-m3-cB 68 25 0.1642 0.1618 0.4400 2.4 2yiz-a1-m3-cB_2yiz-a1-m3-cD
13 2yiz-a1-m2-cC 68 25 0.1642 0.1618 0.4400 2.4 2yiz-a1-m2-cC_2yiz-a1-m3-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600