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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
SWEEESTGIDLGFGPGIVPSVSNHEGGTYVRYNGLGNVDPNYKNLISKRSLIGQIGNKYG
YDIDLFDYQGDFLEVFLPHKPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7c5z-a1-m1-cA 82 82 1.0000 1.0000 1.0000 9.06e-56 7c5z-a1-m1-cB_7c5z-a1-m1-cA
2 7c5z-a1-m1-cB 78 77 0.9390 0.9872 1.0000 2.71e-51 7c5z-a1-m1-cB_7c5z-a1-m1-cA
3 3myr-a6-m1-cF 561 45 0.2195 0.0321 0.4000 0.12 3myr-a6-m1-cH_3myr-a6-m1-cF
4 3myr-a6-m1-cH 559 45 0.2195 0.0322 0.4000 0.12 3myr-a6-m1-cH_3myr-a6-m1-cF
5 1gu3-a1-m2-cA 142 54 0.2317 0.1338 0.3519 0.45 1gu3-a1-m1-cA_1gu3-a1-m2-cA
6 1gu3-a1-m1-cA 142 54 0.2317 0.1338 0.3519 0.45 1gu3-a1-m1-cA_1gu3-a1-m2-cA
7 1oms-a1-m1-cC 115 40 0.1585 0.1130 0.3250 2.1 1oms-a1-m1-cA_1oms-a1-m1-cC
8 1oms-a1-m1-cB 113 40 0.1585 0.1150 0.3250 2.2 1oms-a1-m1-cA_1oms-a1-m1-cB
9 1oms-a1-m1-cA 112 40 0.1585 0.1161 0.3250 2.2 1oms-a1-m1-cA_1oms-a1-m1-cB, 1oms-a1-m1-cA_1oms-a1-m1-cC
10 4qay-a2-m2-cA 248 46 0.1829 0.0605 0.3261 3.3 4qay-a2-m1-cA_4qay-a2-m2-cA
11 4qay-a2-m1-cA 248 46 0.1829 0.0605 0.3261 3.3 4qay-a2-m1-cA_4qay-a2-m2-cA
12 3gte-a1-m1-cB 341 55 0.2073 0.0499 0.3091 4.2 3gte-a1-m1-cA_3gte-a1-m1-cB
13 3gte-a1-m1-cA 341 55 0.2073 0.0499 0.3091 4.2 3gte-a1-m1-cA_3gte-a1-m1-cB
14 7pds-a1-m1-cB 448 31 0.1341 0.0246 0.3548 4.6 7pds-a1-m1-cB_7pds-a1-m1-cC
15 3cnf-a1-m9-cA 920 60 0.2195 0.0196 0.3000 5.0 3cnf-a1-m8-cA_3cnf-a1-m9-cA, 3cnf-a1-m9-cA_3cnf-a1-m9-cB
16 3cnf-a1-m8-cA 920 60 0.2195 0.0196 0.3000 5.0 3cnf-a1-m8-cA_3cnf-a1-m9-cA
17 3cnf-a1-m24-cA 920 60 0.2195 0.0196 0.3000 5.0 3cnf-a1-m24-cA_3cnf-a1-m9-cB
18 3cnf-a1-m10-cA 920 60 0.2195 0.0196 0.3000 5.0 3cnf-a1-m10-cA_3cnf-a1-m9-cB
19 3cnf-a1-m9-cB 924 60 0.2195 0.0195 0.3000 5.0 3cnf-a1-m10-cA_3cnf-a1-m9-cB, 3cnf-a1-m24-cA_3cnf-a1-m9-cB, 3cnf-a1-m54-cB_3cnf-a1-m9-cB, 3cnf-a1-m9-cA_3cnf-a1-m9-cB
20 3cnf-a1-m54-cB 924 60 0.2195 0.0195 0.3000 5.0 3cnf-a1-m54-cB_3cnf-a1-m9-cB
21 7pds-a1-m1-cC 451 31 0.1341 0.0244 0.3548 5.1 7pds-a1-m1-cB_7pds-a1-m1-cC
22 3i1i-a2-m3-cB 355 43 0.1829 0.0423 0.3488 5.5 3i1i-a2-m1-cB_3i1i-a2-m3-cB, 3i1i-a2-m3-cB_3i1i-a2-m3-cA
23 3i1i-a2-m1-cB 355 43 0.1829 0.0423 0.3488 5.5 3i1i-a2-m1-cB_3i1i-a2-m3-cB
24 3rmr-a4-m2-cA 233 51 0.1829 0.0644 0.2941 5.5 3rmr-a4-m2-cB_3rmr-a4-m2-cA
25 3i1i-a2-m3-cA 356 43 0.1829 0.0421 0.3488 5.7 3i1i-a2-m3-cB_3i1i-a2-m3-cA

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Reference:
Jacob Schwartz et al.

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