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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
SWEPPTEAETKVLQARRERQDRISRLMGDYLLRGYRMLGETCADCGTILLQDKQRKIYCV
ACQEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6hcz-a1-m1-cA 65 65 1.0000 1.0000 1.0000 2.28e-43 6hcz-a1-m1-cA_6hcz-a1-m1-cB
2 6hcz-a1-m1-cB 65 64 0.9846 0.9846 1.0000 1.80e-42 6hcz-a1-m1-cA_6hcz-a1-m1-cB
3 4x5t-a1-m1-cD 308 33 0.2000 0.0422 0.3939 2.3 4x5t-a1-m1-cC_4x5t-a1-m1-cD
4 4x5t-a1-m1-cC 308 33 0.2000 0.0422 0.3939 2.3 4x5t-a1-m1-cC_4x5t-a1-m1-cD
5 2cse-a1-m9-c1 1264 35 0.1846 0.0095 0.3429 2.6 2cse-a1-m7-c1_2cse-a1-m9-c1, 2cse-a1-m8-c1_2cse-a1-m9-c1
6 2cse-a1-m8-c1 1264 35 0.1846 0.0095 0.3429 2.6 2cse-a1-m8-c1_2cse-a1-m9-c1
7 2cse-a1-m7-c1 1264 35 0.1846 0.0095 0.3429 2.6 2cse-a1-m7-c1_2cse-a1-m9-c1
8 6ysf-a1-m1-cD 252 29 0.1846 0.0476 0.4138 7.0 6ysf-a1-m1-cC_6ysf-a1-m1-cD
9 6ysf-a1-m1-cC 252 29 0.1846 0.0476 0.4138 7.0 6ysf-a1-m1-cC_6ysf-a1-m1-cD
10 3nd1-a1-m1-cB 249 30 0.1846 0.0482 0.4000 7.8 3nd1-a1-m1-cA_3nd1-a1-m1-cB
11 3nd1-a1-m1-cA 244 30 0.1846 0.0492 0.4000 8.2 3nd1-a1-m1-cA_3nd1-a1-m1-cB
12 4xxv-a1-m1-cB 355 40 0.2154 0.0394 0.3500 9.7 4xxv-a1-m1-cB_4xxv-a1-m1-cA
13 4xxv-a1-m1-cA 356 40 0.2154 0.0393 0.3500 9.8 4xxv-a1-m1-cB_4xxv-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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