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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=27)
SWMEEVIKLCGRELVRAQIAICGMSTW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6rlx-a1-m1-cB 27 27 1.0000 1.0000 1.0000 9.33e-14 6rlx-a1-m1-cD_6rlx-a1-m1-cB
2 6rlx-a1-m1-cD 25 25 0.9259 1.0000 1.0000 6.03e-12 6rlx-a1-m1-cD_6rlx-a1-m1-cB
3 7ce1-a6-m1-cS 259 17 0.3704 0.0386 0.5882 5.6 7ce1-a6-m1-cS_7ce1-a6-m1-cT
4 7ce1-a6-m1-cT 292 18 0.3704 0.0342 0.5556 6.3 7ce1-a6-m1-cS_7ce1-a6-m1-cT
5 7cdx-a1-m1-cB 272 18 0.3704 0.0368 0.5556 6.3 7cdx-a1-m1-cA_7cdx-a1-m1-cB
6 7cdx-a1-m1-cA 272 18 0.3704 0.0368 0.5556 6.3 7cdx-a1-m1-cA_7cdx-a1-m1-cB
7 3gv0-a2-m2-cA 262 18 0.3704 0.0382 0.5556 6.3 3gv0-a2-m1-cA_3gv0-a2-m2-cA
8 3gv0-a2-m1-cA 262 18 0.3704 0.0382 0.5556 6.3 3gv0-a2-m1-cA_3gv0-a2-m2-cA
9 3r19-a1-m2-cA 372 17 0.2963 0.0215 0.4706 7.0 3r19-a1-m1-cA_3r19-a1-m2-cA
10 3r19-a1-m1-cA 372 17 0.2963 0.0215 0.4706 7.0 3r19-a1-m1-cA_3r19-a1-m2-cA
11 3hbg-a1-m2-cA 353 17 0.2963 0.0227 0.4706 7.1 3hbg-a1-m1-cA_3hbg-a1-m2-cA
12 3hbg-a1-m1-cA 353 17 0.2963 0.0227 0.4706 7.1 3hbg-a1-m1-cA_3hbg-a1-m2-cA
13 3i4u-a1-m2-cA 241 13 0.2963 0.0332 0.6154 8.7 3i4u-a1-m1-cA_3i4u-a1-m2-cA
14 3i4u-a1-m1-cA 241 13 0.2963 0.0332 0.6154 8.7 3i4u-a1-m1-cA_3i4u-a1-m2-cA
15 7etx-a1-m2-cA 472 23 0.2963 0.0169 0.3478 8.9 7etx-a1-m1-cA_7etx-a1-m2-cA
16 7etx-a1-m1-cA 472 23 0.2963 0.0169 0.3478 8.9 7etx-a1-m1-cA_7etx-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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