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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
SYSAYFAKAGFQFPAGLSALVAGIVALNVCTGRPTKGTKEISNAEYNATPIGYLQSPDQH
PTAFPKVPGMKDVHGSPHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6rd5-a1-m2-c0 79 79 1.0000 1.0000 1.0000 7.34e-55 6rd5-a1-m1-c0_6rd5-a1-m2-c0
2 6rd5-a1-m1-c0 79 79 1.0000 1.0000 1.0000 7.34e-55 6rd5-a1-m1-c0_6rd5-a1-m2-c0
3 7uky-a1-m1-cB 383 48 0.2025 0.0418 0.3333 0.83 7uky-a1-m1-cB_7uky-a1-m1-cA
4 7uky-a1-m1-cA 385 48 0.2025 0.0416 0.3333 0.91 7uky-a1-m1-cB_7uky-a1-m1-cA
5 3es5-a1-m9-cB 378 56 0.2532 0.0529 0.3571 2.0 3es5-a1-m54-cB_3es5-a1-m9-cB, 3es5-a1-m9-cB_3es5-a1-m10-cA, 3es5-a1-m9-cB_3es5-a1-m24-cA, 3es5-a1-m9-cB_3es5-a1-m55-cA, 3es5-a1-m9-cB_3es5-a1-m9-cA
6 3es5-a1-m54-cB 378 56 0.2532 0.0529 0.3571 2.0 3es5-a1-m54-cB_3es5-a1-m9-cB
7 3es5-a1-m9-cA 379 56 0.2532 0.0528 0.3571 2.0 3es5-a1-m55-cA_3es5-a1-m9-cA, 3es5-a1-m8-cA_3es5-a1-m9-cA, 3es5-a1-m9-cB_3es5-a1-m9-cA
8 3es5-a1-m8-cA 379 56 0.2532 0.0528 0.3571 2.0 3es5-a1-m8-cA_3es5-a1-m9-cA
9 3es5-a1-m55-cA 379 56 0.2532 0.0528 0.3571 2.0 3es5-a1-m55-cA_3es5-a1-m9-cA, 3es5-a1-m9-cB_3es5-a1-m55-cA
10 3es5-a1-m24-cA 379 56 0.2532 0.0528 0.3571 2.0 3es5-a1-m9-cB_3es5-a1-m24-cA
11 3es5-a1-m10-cA 379 56 0.2532 0.0528 0.3571 2.0 3es5-a1-m9-cB_3es5-a1-m10-cA
12 3vcy-a5-m1-cD 419 43 0.1646 0.0310 0.3023 3.0 3vcy-a5-m1-cA_3vcy-a5-m1-cD, 3vcy-a5-m1-cB_3vcy-a5-m1-cD, 3vcy-a5-m1-cC_3vcy-a5-m1-cD
13 3vcy-a5-m1-cC 419 43 0.1646 0.0310 0.3023 3.0 3vcy-a5-m1-cC_3vcy-a5-m1-cD
14 3vcy-a5-m1-cB 419 43 0.1646 0.0310 0.3023 3.0 3vcy-a5-m1-cB_3vcy-a5-m1-cD
15 3vcy-a5-m1-cA 419 43 0.1646 0.0310 0.3023 3.0 3vcy-a5-m1-cA_3vcy-a5-m1-cD
16 4r7u-a1-m1-cC 419 41 0.1519 0.0286 0.2927 4.6 4r7u-a1-m1-cD_4r7u-a1-m1-cC
17 4r7u-a1-m1-cD 418 41 0.1519 0.0287 0.2927 4.8 4r7u-a1-m1-cA_4r7u-a1-m1-cD, 4r7u-a1-m1-cB_4r7u-a1-m1-cD, 4r7u-a1-m1-cD_4r7u-a1-m1-cC
18 4r7u-a1-m1-cB 418 41 0.1519 0.0287 0.2927 4.8 4r7u-a1-m1-cB_4r7u-a1-m1-cD
19 4r7u-a1-m1-cA 418 41 0.1519 0.0287 0.2927 4.8 4r7u-a1-m1-cA_4r7u-a1-m1-cD
20 6lta-a1-m2-cA 931 37 0.1519 0.0129 0.3243 5.5 6lta-a1-m1-cA_6lta-a1-m2-cA
21 6lta-a1-m1-cA 931 37 0.1519 0.0129 0.3243 5.5 6lta-a1-m1-cA_6lta-a1-m2-cA
22 3f0c-a1-m2-cA 187 41 0.1899 0.0802 0.3659 6.5 3f0c-a1-m1-cA_3f0c-a1-m2-cA
23 3f0c-a1-m1-cA 187 41 0.1899 0.0802 0.3659 6.5 3f0c-a1-m1-cA_3f0c-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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