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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
SYSIYVYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQ
TAVRLLLPGELAKHAVSEGTKAVTKYTSSK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3c9k-a1-m9-cF 90 90 1.0000 1.0000 1.0000 2.09e-62 3c9k-a1-m8-cB_3c9k-a1-m9-cF
2 3c9k-a1-m8-cB 90 90 1.0000 1.0000 1.0000 2.09e-62 3c9k-a1-m8-cB_3c9k-a1-m9-cF
3 1zbb-a1-m2-ch 99 90 0.9667 0.8788 0.9667 2.69e-61 1zbb-a1-m1-cH_1zbb-a1-m2-ch
4 1zbb-a1-m1-cH 99 90 0.9667 0.8788 0.9667 2.69e-61 1zbb-a1-m1-cH_1zbb-a1-m2-ch
5 6m2m-a1-m1-cL 89 89 0.8000 0.8090 0.8090 1.56e-51 6m2m-a1-m1-cB_6m2m-a1-m1-cL
6 6m2m-a1-m1-cB 86 85 0.7667 0.8023 0.8118 4.03e-49 6m2m-a1-m1-cB_6m2m-a1-m1-cL
7 3ibx-a1-m2-cA 221 61 0.2000 0.0814 0.2951 0.16 3ibx-a1-m2-cD_3ibx-a1-m2-cA
8 3ibx-a1-m1-cA 221 61 0.2000 0.0814 0.2951 0.16 3ibx-a1-m2-cD_3ibx-a1-m1-cA
9 2rd3-a3-m2-cD 218 61 0.2000 0.0826 0.2951 0.18 2rd3-a3-m1-cD_2rd3-a3-m2-cD
10 2rd3-a3-m1-cD 218 61 0.2000 0.0826 0.2951 0.18 2rd3-a3-m1-cD_2rd3-a3-m2-cD
11 2rp5-a1-m1-cB 117 34 0.1556 0.1197 0.4118 0.73 2rp5-a1-m1-cA_2rp5-a1-m1-cB
12 2rp5-a1-m1-cA 117 34 0.1556 0.1197 0.4118 0.73 2rp5-a1-m1-cA_2rp5-a1-m1-cB
13 5hsi-a1-m1-cA 602 59 0.1333 0.0199 0.2034 2.5 5hsi-a1-m1-cB_5hsi-a1-m1-cA
14 5hsi-a1-m1-cB 597 59 0.1333 0.0201 0.2034 2.6 5hsi-a1-m1-cB_5hsi-a1-m1-cA
15 7lv9-a1-m1-cE 102 50 0.1556 0.1373 0.2800 2.6 7lv9-a1-m1-cA_7lv9-a1-m1-cE
16 7lv9-a1-m1-cA 102 50 0.1556 0.1373 0.2800 2.6 7lv9-a1-m1-cA_7lv9-a1-m1-cE
17 6m2m-a1-m1-cK 81 40 0.1556 0.1728 0.3500 5.8 6m2m-a1-m1-cK_6m2m-a1-m1-cA
18 6m2m-a1-m1-cA 88 40 0.1556 0.1591 0.3500 7.3 6m2m-a1-m1-cK_6m2m-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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