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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
TAAVALVKANENAAAILNLKNAIQKTNAAVADVVQATQSLGTAVQAVQDHINSVVSPAIT
AANY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1svf-a1-m3-cA 64 64 1.0000 1.0000 1.0000 5.19e-37 1svf-a1-m2-cA_1svf-a1-m3-cA
2 1svf-a1-m2-cA 64 64 1.0000 1.0000 1.0000 5.19e-37 1svf-a1-m2-cA_1svf-a1-m3-cA
3 4gip-a1-m1-cF 375 63 0.9844 0.1680 1.0000 2.46e-33 4gip-a1-m1-cE_4gip-a1-m1-cF
4 4gip-a1-m1-cE 375 63 0.9844 0.1680 1.0000 2.46e-33 4gip-a1-m1-cE_4gip-a1-m1-cF
5 2fyz-a1-m1-cC 58 54 0.4688 0.5172 0.5556 2.90e-13 2fyz-a1-m1-cA_2fyz-a1-m1-cC
6 2fyz-a1-m1-cA 57 54 0.4688 0.5263 0.5556 3.03e-13 2fyz-a1-m1-cA_2fyz-a1-m1-cC
7 6xye-a1-m1-cF 357 59 0.3750 0.0672 0.4068 5.25e-09 6xye-a1-m1-cD_6xye-a1-m1-cF
8 6xye-a1-m1-cD 357 59 0.3750 0.0672 0.4068 5.25e-09 6xye-a1-m1-cD_6xye-a1-m1-cF
9 5yzc-a1-m3-cB 367 59 0.3750 0.0654 0.4068 2.21e-07 5yzc-a1-m2-cB_5yzc-a1-m3-cB
10 5yzc-a1-m2-cB 367 59 0.3750 0.0654 0.4068 2.21e-07 5yzc-a1-m2-cB_5yzc-a1-m3-cB
11 8fej-a1-m1-cC 456 30 0.3125 0.0439 0.6667 2.39e-05 8fej-a1-m1-cB_8fej-a1-m1-cC
12 8fej-a1-m1-cB 456 30 0.3125 0.0439 0.6667 2.39e-05 8fej-a1-m1-cB_8fej-a1-m1-cC
13 5b6a-a1-m2-cA 288 25 0.1719 0.0382 0.4400 1.3 5b6a-a1-m1-cA_5b6a-a1-m2-cA
14 5b6a-a1-m1-cA 288 25 0.1719 0.0382 0.4400 1.3 5b6a-a1-m1-cA_5b6a-a1-m2-cA
15 3b97-a2-m1-cD 431 25 0.1250 0.0186 0.3200 9.0 3b97-a2-m1-cD_3b97-a2-m1-cC
16 3b97-a2-m1-cC 433 25 0.1250 0.0185 0.3200 9.0 3b97-a2-m1-cD_3b97-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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