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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
TACTATQQTAAYKTLVSILSDASFNQCSTDSGYSMLTAKALPTTAQYKLMCASTACNTMI
KKIVTLNPPNCDLTVPTSGLVLNVYSYANGFSNKCSSL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1beo-a1-m2-cA 98 98 1.0000 1.0000 1.0000 2.44e-66 1beo-a1-m1-cA_1beo-a1-m2-cA
2 1beo-a1-m1-cA 98 98 1.0000 1.0000 1.0000 2.44e-66 1beo-a1-m1-cA_1beo-a1-m2-cA
3 1bxm-a1-m2-cA 99 96 0.9694 0.9596 0.9896 1.46e-64 1bxm-a1-m1-cA_1bxm-a1-m2-cA
4 1bxm-a1-m1-cA 99 96 0.9694 0.9596 0.9896 1.46e-64 1bxm-a1-m1-cA_1bxm-a1-m2-cA
5 2aib-a1-m1-cB 98 98 0.8776 0.8776 0.8776 1.38e-58 2aib-a1-m1-cA_2aib-a1-m1-cB
6 2aib-a1-m1-cA 98 98 0.8776 0.8776 0.8776 1.38e-58 2aib-a1-m1-cA_2aib-a1-m1-cB
7 2a8f-a1-m1-cB 98 98 0.8776 0.8776 0.8776 1.38e-58 2a8f-a1-m1-cA_2a8f-a1-m1-cB
8 2a8f-a1-m1-cA 98 98 0.8776 0.8776 0.8776 1.38e-58 2a8f-a1-m1-cA_2a8f-a1-m1-cB
9 6huy-a2-m1-cC 351 65 0.2245 0.0627 0.3385 1.0 6huy-a2-m1-cC_6huy-a2-m1-cD
10 6huy-a2-m1-cD 354 64 0.2245 0.0621 0.3438 1.8 6huy-a2-m1-cC_6huy-a2-m1-cD
11 2qvy-a1-m2-cX 499 26 0.1122 0.0220 0.4231 2.8 2qvy-a1-m1-cX_2qvy-a1-m2-cX
12 2qvy-a1-m1-cX 499 26 0.1122 0.0220 0.4231 2.8 2qvy-a1-m1-cX_2qvy-a1-m2-cX
13 1y8g-a1-m1-cA 292 38 0.1020 0.0342 0.2632 3.1 1y8g-a1-m1-cA_1y8g-a1-m1-cB
14 1y8g-a1-m1-cB 292 38 0.1020 0.0342 0.2632 3.2 1y8g-a1-m1-cA_1y8g-a1-m1-cB
15 7kcn-a1-m2-cB 117 68 0.2041 0.1709 0.2941 6.6 7kcn-a1-m1-cA_7kcn-a1-m2-cB, 7kcn-a1-m1-cB_7kcn-a1-m2-cB, 7kcn-a1-m2-cA_7kcn-a1-m2-cB
16 7kcn-a1-m1-cB 117 68 0.2041 0.1709 0.2941 6.6 7kcn-a1-m1-cB_7kcn-a1-m2-cB
17 7kcn-a1-m2-cA 114 68 0.2041 0.1754 0.2941 7.0 7kcn-a1-m2-cA_7kcn-a1-m2-cB
18 7kcn-a1-m1-cA 114 68 0.2041 0.1754 0.2941 7.0 7kcn-a1-m1-cA_7kcn-a1-m2-cB
19 7som-a1-m1-cE 1516 31 0.1327 0.0086 0.4194 7.8 7som-a1-m1-cD_7som-a1-m1-cE
20 7som-a1-m1-cD 1516 31 0.1327 0.0086 0.4194 7.8 7som-a1-m1-cD_7som-a1-m1-cE
21 3tcm-a1-m1-cB 479 54 0.1224 0.0251 0.2222 8.6 3tcm-a1-m1-cA_3tcm-a1-m1-cB
22 3tcm-a1-m1-cA 479 54 0.1224 0.0251 0.2222 8.6 3tcm-a1-m1-cA_3tcm-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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