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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
TAFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDRIIVAIMETNPSILEVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hv8-a2-m1-cE 55 55 1.0000 1.0000 1.0000 1.35e-33 2hv8-a2-m1-cF_2hv8-a2-m1-cE
2 2hv8-a2-m1-cF 41 41 0.7455 1.0000 1.0000 9.20e-24 2hv8-a2-m1-cF_2hv8-a2-m1-cE
3 4uj4-a3-m3-cL 38 38 0.6909 1.0000 1.0000 2.49e-21 4uj4-a3-m1-cC_4uj4-a3-m3-cL
4 4uj4-a3-m1-cC 36 36 0.6545 1.0000 1.0000 7.18e-20 4uj4-a3-m1-cC_4uj4-a3-m3-cL
5 2gzd-a1-m1-cD 34 22 0.2364 0.3824 0.5909 0.55 2gzd-a1-m1-cC_2gzd-a1-m1-cD
6 2gzd-a1-m1-cC 34 22 0.2364 0.3824 0.5909 0.55 2gzd-a1-m1-cC_2gzd-a1-m1-cD
7 2k6s-a1-m1-cB 41 41 0.2182 0.2927 0.2927 4.3 2k6s-a1-m1-cA_2k6s-a1-m1-cB
8 2k6s-a1-m1-cA 41 41 0.2182 0.2927 0.2927 4.3 2k6s-a1-m1-cA_2k6s-a1-m1-cB
9 2zpb-a2-m2-cB 211 36 0.1455 0.0379 0.2222 5.4 2zpb-a2-m1-cB_2zpb-a2-m2-cB
10 2zpb-a2-m1-cB 211 36 0.1455 0.0379 0.2222 5.4 2zpb-a2-m1-cB_2zpb-a2-m2-cB
11 5dbn-a2-m1-cG 215 38 0.2727 0.0698 0.3947 6.6 5dbn-a2-m1-cE_5dbn-a2-m1-cG
12 1vjq-a1-m1-cB 71 17 0.1455 0.1127 0.4706 7.6 1vjq-a1-m1-cA_1vjq-a1-m1-cB
13 1vjq-a1-m1-cA 71 17 0.1455 0.1127 0.4706 7.6 1vjq-a1-m1-cA_1vjq-a1-m1-cB
14 5dbn-a2-m1-cE 213 37 0.2727 0.0704 0.4054 9.7 5dbn-a2-m1-cE_5dbn-a2-m1-cG

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Reference:
Jacob Schwartz et al.

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