Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
TAIEANSRMLKALIEIAKAIWKALWANSLLLEATSRGDTERMRQWAEEARKIYKEAEKII
DRADEIVEEAKKRHD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5jqz-a1-m1-cB 75 75 1.0000 1.0000 1.0000 5.45e-47 5jqz-a1-m1-cA_5jqz-a1-m1-cB
2 5jqz-a1-m1-cA 75 75 1.0000 1.0000 1.0000 5.45e-47 5jqz-a1-m1-cA_5jqz-a1-m1-cB
3 8fbj-a1-m3-cA 307 68 0.2933 0.0717 0.3235 2.9 8fbj-a1-m2-cA_8fbj-a1-m3-cA
4 8fbj-a1-m2-cA 307 68 0.2933 0.0717 0.3235 2.9 8fbj-a1-m2-cA_8fbj-a1-m3-cA
5 3qk9-a1-m2-cB 175 36 0.1600 0.0686 0.3333 4.4 3qk9-a1-m1-cA_3qk9-a1-m2-cB
6 3qk9-a1-m1-cA 174 36 0.1600 0.0690 0.3333 4.7 3qk9-a1-m1-cA_3qk9-a1-m2-cB
7 8fbn-a2-m1-cF 220 22 0.1600 0.0545 0.5455 5.0 8fbn-a2-m1-cF_8fbn-a2-m1-cC
8 8fbn-a2-m1-cC 226 22 0.1600 0.0531 0.5455 5.1 8fbn-a2-m1-cF_8fbn-a2-m1-cC
9 2fxt-a1-m2-cA 192 36 0.1600 0.0625 0.3333 5.5 2fxt-a1-m1-cA_2fxt-a1-m2-cA
10 2fxt-a1-m1-cA 192 36 0.1600 0.0625 0.3333 5.5 2fxt-a1-m1-cA_2fxt-a1-m2-cA
11 2ap1-a2-m2-cA 305 36 0.1467 0.0361 0.3056 7.7 2ap1-a2-m1-cA_2ap1-a2-m2-cA
12 2ap1-a2-m1-cA 305 36 0.1467 0.0361 0.3056 7.7 2ap1-a2-m1-cA_2ap1-a2-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600