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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
TASVSNTQNKLNELLDAIRQEFLQVSQEANTYRLQNQKDYDFKMNQQLAEMQQIRNTVYE
LELTHRKMKDAYEEEIKH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vp8-a1-m1-cB 80 78 1.0000 0.9750 1.0000 2.26e-52 3vp8-a1-m1-cD_3vp8-a1-m1-cB
2 3vp8-a1-m1-cD 78 78 1.0000 1.0000 1.0000 2.28e-52 3vp8-a1-m1-cA_3vp8-a1-m1-cD, 3vp8-a1-m1-cC_3vp8-a1-m1-cD, 3vp8-a1-m1-cD_3vp8-a1-m1-cB
3 3vp8-a1-m1-cC 77 76 0.9744 0.9870 1.0000 8.77e-51 3vp8-a1-m1-cC_3vp8-a1-m1-cD
4 3vp8-a1-m1-cA 75 75 0.9615 1.0000 1.0000 1.36e-49 3vp8-a1-m1-cA_3vp8-a1-m1-cD
5 3vp9-a1-m2-cB 77 66 0.8333 0.8442 0.9848 4.79e-42 3vp9-a1-m2-cA_3vp9-a1-m2-cB
6 3vp9-a1-m2-cA 70 63 0.7949 0.8857 0.9841 2.94e-40 3vp9-a1-m1-cA_3vp9-a1-m2-cA, 3vp9-a1-m2-cA_3vp9-a1-m2-cB
7 3vp9-a1-m1-cA 70 63 0.7949 0.8857 0.9841 2.94e-40 3vp9-a1-m1-cA_3vp9-a1-m2-cA
8 4f23-a1-m1-cC 509 30 0.1538 0.0236 0.4000 5.9 4f23-a1-m1-cB_4f23-a1-m1-cC
9 4f23-a1-m1-cB 509 30 0.1538 0.0236 0.4000 5.9 4f23-a1-m1-cB_4f23-a1-m1-cC
10 4kpq-a1-m1-cF 165 30 0.1538 0.0727 0.4000 6.3 4kpq-a1-m1-cD_4kpq-a1-m1-cF
11 4kpq-a1-m1-cD 165 30 0.1538 0.0727 0.4000 6.3 4kpq-a1-m1-cD_4kpq-a1-m1-cF
12 1zjc-a1-m2-cA 413 29 0.1667 0.0315 0.4483 6.6 1zjc-a1-m1-cA_1zjc-a1-m2-cA
13 1zjc-a1-m1-cA 413 29 0.1667 0.0315 0.4483 6.6 1zjc-a1-m1-cA_1zjc-a1-m2-cA
14 3s88-a5-m9-cJ 106 43 0.1923 0.1415 0.3488 8.7 3s88-a5-m5-cJ_3s88-a5-m9-cJ
15 3s88-a5-m5-cJ 106 43 0.1923 0.1415 0.3488 8.7 3s88-a5-m5-cJ_3s88-a5-m9-cJ

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Reference:
Jacob Schwartz et al.

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