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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
TDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIYTELEPPCRFKYLYFIKG
LNNLNRGMVLGSLAATVR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8dqu-a1-m6-cC 78 78 1.0000 1.0000 1.0000 1.04e-53 8dqu-a1-m6-cF_8dqu-a1-m6-cC
2 8dqu-a1-m6-cF 74 74 0.9487 1.0000 1.0000 1.46e-50 8dqu-a1-m6-cF_8dqu-a1-m6-cC
3 2j98-a1-m1-cA 106 88 0.4744 0.3491 0.4205 9.24e-14 2j98-a1-m1-cB_2j98-a1-m1-cA
4 2j97-a1-m2-cA 98 72 0.4103 0.3265 0.4444 3.08e-13 2j97-a1-m1-cA_2j97-a1-m2-cA
5 2j97-a1-m1-cA 98 72 0.4103 0.3265 0.4444 3.08e-13 2j97-a1-m1-cA_2j97-a1-m2-cA
6 2j98-a1-m1-cB 102 87 0.4615 0.3529 0.4138 5.82e-13 2j98-a1-m1-cB_2j98-a1-m1-cA
7 5c94-a1-m2-cA 116 81 0.3974 0.2672 0.3827 1.90e-11 5c94-a1-m1-cA_5c94-a1-m2-cA
8 5c94-a1-m1-cA 116 81 0.3974 0.2672 0.3827 1.90e-11 5c94-a1-m1-cA_5c94-a1-m2-cA
9 5hiz-a1-m1-cB 96 81 0.4744 0.3854 0.4568 5.18e-11 5hiz-a1-m1-cA_5hiz-a1-m1-cB
10 5hiz-a1-m1-cA 96 81 0.4744 0.3854 0.4568 5.18e-11 5hiz-a1-m1-cA_5hiz-a1-m1-cB
11 5ym6-a2-m1-cC 99 74 0.3462 0.2727 0.3649 6.28e-09 5ym6-a2-m1-cD_5ym6-a2-m1-cC
12 5ym6-a2-m1-cD 95 72 0.3462 0.2842 0.3750 1.26e-07 5ym6-a2-m1-cD_5ym6-a2-m1-cC
13 2z6e-a2-m1-cC 379 31 0.1282 0.0264 0.3226 0.88 2z6e-a2-m1-cC_2z6e-a2-m1-cD
14 2z6e-a2-m1-cD 390 31 0.1282 0.0256 0.3226 0.88 2z6e-a2-m1-cC_2z6e-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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