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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
TDELLRLAKEQAELLKEIKKLVEEIARLVKEIQEDPSDELLKTLAELVRKLKELVEDMER
SMKEQLYIIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5j10-a1-m1-cB 70 70 1.0000 1.0000 1.0000 5.85e-40 5j10-a1-m1-cA_5j10-a1-m1-cB
2 5j10-a1-m1-cA 70 70 1.0000 1.0000 1.0000 5.85e-40 5j10-a1-m1-cA_5j10-a1-m1-cB
3 5j0k-a1-m1-cA 74 67 0.4143 0.3919 0.4328 4.93e-05 5j0k-a1-m1-cB_5j0k-a1-m1-cA
4 5j0k-a1-m1-cB 73 67 0.4143 0.3973 0.4328 4.99e-05 5j0k-a1-m1-cB_5j0k-a1-m1-cA
5 1wle-a1-m1-cA 465 70 0.3000 0.0452 0.3000 0.017 1wle-a1-m1-cA_1wle-a1-m1-cB
6 1wle-a1-m1-cB 469 70 0.3000 0.0448 0.3000 0.019 1wle-a1-m1-cA_1wle-a1-m1-cB
7 2dq0-a1-m1-cB 447 74 0.3571 0.0559 0.3378 0.051 2dq0-a1-m1-cA_2dq0-a1-m1-cB
8 2dq0-a1-m1-cA 447 74 0.3571 0.0559 0.3378 0.051 2dq0-a1-m1-cA_2dq0-a1-m1-cB
9 7tzb-a1-m1-cB 461 66 0.3000 0.0456 0.3182 0.056 7tzb-a1-m1-cB_7tzb-a1-m1-cA
10 5j2l-a1-m1-cB 76 40 0.2571 0.2368 0.4500 0.13 5j2l-a1-m1-cA_5j2l-a1-m1-cB
11 5j2l-a1-m1-cB 76 45 0.2714 0.2500 0.4222 8.1 5j2l-a1-m1-cA_5j2l-a1-m1-cB
12 5j2l-a1-m1-cA 76 40 0.2571 0.2368 0.4500 0.13 5j2l-a1-m1-cA_5j2l-a1-m1-cB
13 5j2l-a1-m1-cA 76 45 0.2714 0.2500 0.4222 8.1 5j2l-a1-m1-cA_5j2l-a1-m1-cB
14 7tzb-a1-m1-cA 463 68 0.3000 0.0454 0.3088 0.22 7tzb-a1-m1-cB_7tzb-a1-m1-cA
15 3ja6-a1-m1-cK 309 68 0.2286 0.0518 0.2353 0.52 3ja6-a1-m1-cH_3ja6-a1-m1-cK
16 2ch7-a1-m1-cA 309 68 0.2286 0.0518 0.2353 0.52 2ch7-a1-m1-cB_2ch7-a1-m1-cA
17 1pix-a2-m2-cB 586 53 0.2714 0.0324 0.3585 0.63 1pix-a2-m1-cA_1pix-a2-m2-cB, 1pix-a2-m1-cB_1pix-a2-m2-cB, 1pix-a2-m2-cA_1pix-a2-m2-cB
18 1pix-a2-m2-cA 586 53 0.2714 0.0324 0.3585 0.63 1pix-a2-m2-cA_1pix-a2-m2-cB
19 1pix-a2-m1-cB 586 53 0.2714 0.0324 0.3585 0.63 1pix-a2-m1-cB_1pix-a2-m2-cB
20 1pix-a2-m1-cA 586 53 0.2714 0.0324 0.3585 0.63 1pix-a2-m1-cA_1pix-a2-m2-cB
21 2jst-a1-m1-cB 62 58 0.3000 0.3387 0.3621 0.74 2jst-a1-m1-cA_2jst-a1-m1-cB
22 2jst-a1-m1-cA 62 58 0.3000 0.3387 0.3621 0.74 2jst-a1-m1-cA_2jst-a1-m1-cB
23 2i7u-a1-m1-cB 62 58 0.3000 0.3387 0.3621 0.74 2i7u-a1-m1-cA_2i7u-a1-m1-cB
24 2i7u-a1-m1-cA 62 58 0.3000 0.3387 0.3621 0.74 2i7u-a1-m1-cA_2i7u-a1-m1-cB
25 3ja6-a1-m1-cR 307 64 0.2286 0.0521 0.2500 0.93 3ja6-a1-m1-cP_3ja6-a1-m1-cR
26 3ja6-a1-m1-cP 307 64 0.2286 0.0521 0.2500 0.93 3ja6-a1-m1-cP_3ja6-a1-m1-cR
27 3ja6-a1-m1-cH 307 64 0.2286 0.0521 0.2500 0.93 3ja6-a1-m1-cH_3ja6-a1-m1-cK
28 2ch7-a1-m1-cB 307 64 0.2286 0.0521 0.2500 0.93 2ch7-a1-m1-cB_2ch7-a1-m1-cA
29 6npl-a1-m1-cB 861 58 0.2286 0.0186 0.2759 2.6 6npl-a1-m1-cA_6npl-a1-m1-cB
30 6npl-a1-m1-cA 861 58 0.2286 0.0186 0.2759 2.6 6npl-a1-m1-cA_6npl-a1-m1-cB
31 6zti-a1-m1-cC 464 25 0.1571 0.0237 0.4400 2.8 6zti-a1-m1-cC_6zti-a1-m1-cD
32 6zti-a1-m1-cD 466 25 0.1571 0.0236 0.4400 2.8 6zti-a1-m1-cB_6zti-a1-m1-cD, 6zti-a1-m1-cC_6zti-a1-m1-cD
33 6zti-a1-m1-cB 466 25 0.1571 0.0236 0.4400 2.8 6zti-a1-m1-cB_6zti-a1-m1-cD
34 2dfs-a1-m1-cM 994 69 0.3286 0.0231 0.3333 2.9 2dfs-a1-m1-cA_2dfs-a1-m1-cM
35 2dfs-a1-m1-cA 994 69 0.3286 0.0231 0.3333 2.9 2dfs-a1-m1-cA_2dfs-a1-m1-cM
36 1oah-a1-m1-cA 475 29 0.2000 0.0295 0.4828 2.9 1oah-a1-m1-cA_1oah-a1-m1-cB
37 1oah-a1-m1-cB 482 29 0.2000 0.0290 0.4828 3.3 1oah-a1-m1-cA_1oah-a1-m1-cB
38 1wyy-a3-m5-cB 124 54 0.2857 0.1613 0.3704 3.5 1wyy-a3-m4-cB_1wyy-a3-m5-cB
39 1wyy-a3-m4-cB 124 54 0.2857 0.1613 0.3704 3.5 1wyy-a3-m4-cB_1wyy-a3-m5-cB
40 7pds-a1-m1-cB 448 51 0.2714 0.0424 0.3725 3.7 7pds-a1-m1-cB_7pds-a1-m1-cC
41 7pds-a1-m1-cC 451 51 0.2714 0.0421 0.3725 3.8 7pds-a1-m1-cB_7pds-a1-m1-cC
42 2wvr-a1-m2-cA 70 48 0.3000 0.3000 0.4375 3.9 2wvr-a1-m2-cA_2wvr-a1-m2-cB
43 6g65-a4-m3-cL 30 25 0.1571 0.3667 0.4400 4.4 6g65-a4-m1-cJ_6g65-a4-m3-cL, 6g65-a4-m3-cK_6g65-a4-m3-cL
44 6g65-a4-m3-cK 30 25 0.1571 0.3667 0.4400 4.4 6g65-a4-m3-cJ_6g65-a4-m3-cK, 6g65-a4-m3-cK_6g65-a4-m3-cL
45 6g65-a4-m3-cJ 30 25 0.1571 0.3667 0.4400 4.4 6g65-a4-m1-cL_6g65-a4-m3-cJ, 6g65-a4-m3-cJ_6g65-a4-m3-cK
46 6g65-a4-m1-cL 30 25 0.1571 0.3667 0.4400 4.4 6g65-a4-m1-cK_6g65-a4-m1-cL, 6g65-a4-m1-cL_6g65-a4-m3-cJ
47 6g65-a4-m1-cK 30 25 0.1571 0.3667 0.4400 4.4 6g65-a4-m1-cK_6g65-a4-m1-cL
48 6g65-a4-m1-cJ 30 25 0.1571 0.3667 0.4400 4.4 6g65-a4-m1-cJ_6g65-a4-m3-cL
49 6g65-a3-m3-cI 30 25 0.1571 0.3667 0.4400 4.4 6g65-a3-m1-cG_6g65-a3-m3-cI, 6g65-a3-m3-cH_6g65-a3-m3-cI
50 6g65-a3-m3-cH 30 25 0.1571 0.3667 0.4400 4.4 6g65-a3-m3-cG_6g65-a3-m3-cH, 6g65-a3-m3-cH_6g65-a3-m3-cI
51 6g65-a3-m3-cG 30 25 0.1571 0.3667 0.4400 4.4 6g65-a3-m1-cI_6g65-a3-m3-cG, 6g65-a3-m3-cG_6g65-a3-m3-cH
52 6g65-a3-m1-cI 30 25 0.1571 0.3667 0.4400 4.4 6g65-a3-m1-cH_6g65-a3-m1-cI, 6g65-a3-m1-cI_6g65-a3-m3-cG
53 6g65-a3-m1-cH 30 25 0.1571 0.3667 0.4400 4.4 6g65-a3-m1-cH_6g65-a3-m1-cI
54 6g65-a3-m1-cG 30 25 0.1571 0.3667 0.4400 4.4 6g65-a3-m1-cG_6g65-a3-m3-cI
55 6g65-a2-m2-cF 30 25 0.1571 0.3667 0.4400 4.4 6g65-a2-m1-cD_6g65-a2-m2-cF, 6g65-a2-m2-cE_6g65-a2-m2-cF
56 6g65-a2-m2-cE 30 25 0.1571 0.3667 0.4400 4.4 6g65-a2-m2-cD_6g65-a2-m2-cE, 6g65-a2-m2-cE_6g65-a2-m2-cF
57 6g65-a2-m2-cD 30 25 0.1571 0.3667 0.4400 4.4 6g65-a2-m1-cF_6g65-a2-m2-cD, 6g65-a2-m2-cD_6g65-a2-m2-cE
58 6g65-a2-m1-cF 30 25 0.1571 0.3667 0.4400 4.4 6g65-a2-m1-cE_6g65-a2-m1-cF, 6g65-a2-m1-cF_6g65-a2-m2-cD
59 6g65-a2-m1-cE 30 25 0.1571 0.3667 0.4400 4.4 6g65-a2-m1-cE_6g65-a2-m1-cF
60 6g65-a2-m1-cD 30 25 0.1571 0.3667 0.4400 4.4 6g65-a2-m1-cD_6g65-a2-m2-cF
61 6g65-a1-m2-cC 30 25 0.1571 0.3667 0.4400 4.4 6g65-a1-m1-cA_6g65-a1-m2-cC, 6g65-a1-m2-cB_6g65-a1-m2-cC
62 6g65-a1-m2-cB 30 25 0.1571 0.3667 0.4400 4.4 6g65-a1-m2-cA_6g65-a1-m2-cB, 6g65-a1-m2-cB_6g65-a1-m2-cC
63 6g65-a1-m2-cA 30 25 0.1571 0.3667 0.4400 4.4 6g65-a1-m1-cC_6g65-a1-m2-cA, 6g65-a1-m2-cA_6g65-a1-m2-cB
64 6g65-a1-m1-cC 30 25 0.1571 0.3667 0.4400 4.4 6g65-a1-m1-cB_6g65-a1-m1-cC, 6g65-a1-m1-cC_6g65-a1-m2-cA
65 6g65-a1-m1-cB 30 25 0.1571 0.3667 0.4400 4.4 6g65-a1-m1-cB_6g65-a1-m1-cC
66 6g65-a1-m1-cA 30 25 0.1571 0.3667 0.4400 4.4 6g65-a1-m1-cA_6g65-a1-m2-cC
67 4oky-a1-m2-cC 279 27 0.1714 0.0430 0.4444 4.5 4oky-a1-m1-cC_4oky-a1-m2-cC
68 4oky-a1-m1-cC 279 27 0.1714 0.0430 0.4444 4.5 4oky-a1-m1-cC_4oky-a1-m2-cC
69 2wvr-a1-m2-cB 74 48 0.3000 0.2838 0.4375 4.6 2wvr-a1-m2-cA_2wvr-a1-m2-cB
70 6g67-a1-m4-cB 30 25 0.1714 0.4000 0.4800 5.3 6g67-a1-m2-cA_6g67-a1-m4-cB, 6g67-a1-m4-cA_6g67-a1-m4-cB
71 6g67-a1-m4-cA 30 25 0.1714 0.4000 0.4800 5.3 6g67-a1-m1-cB_6g67-a1-m4-cA, 6g67-a1-m4-cA_6g67-a1-m4-cB
72 6g67-a1-m3-cB 30 25 0.1714 0.4000 0.4800 5.3 6g67-a1-m1-cA_6g67-a1-m3-cB, 6g67-a1-m3-cA_6g67-a1-m3-cB
73 6g67-a1-m3-cA 30 25 0.1714 0.4000 0.4800 5.3 6g67-a1-m2-cB_6g67-a1-m3-cA, 6g67-a1-m3-cA_6g67-a1-m3-cB
74 6g67-a1-m2-cB 30 25 0.1714 0.4000 0.4800 5.3 6g67-a1-m2-cB_6g67-a1-m3-cA
75 6g67-a1-m2-cA 30 25 0.1714 0.4000 0.4800 5.3 6g67-a1-m2-cA_6g67-a1-m4-cB
76 6g67-a1-m1-cB 30 25 0.1714 0.4000 0.4800 5.3 6g67-a1-m1-cB_6g67-a1-m4-cA
77 6g67-a1-m1-cA 30 25 0.1714 0.4000 0.4800 5.3 6g67-a1-m1-cA_6g67-a1-m3-cB
78 4pr9-a1-m1-cA 175 31 0.1429 0.0571 0.3226 5.6 4pr9-a1-m1-cA_4pr9-a1-m1-cB
79 4pr9-a1-m1-cB 176 31 0.1429 0.0568 0.3226 5.7 4pr9-a1-m1-cA_4pr9-a1-m1-cB
80 5l0c-a1-m1-cA 176 31 0.1429 0.0568 0.3226 6.0 5l0c-a1-m2-cC_5l0c-a1-m1-cA
81 5l0c-a1-m2-cC 175 31 0.1429 0.0571 0.3226 6.1 5l0c-a1-m2-cC_5l0c-a1-m1-cA
82 5l0j-a1-m1-cA 165 31 0.1429 0.0606 0.3226 6.3 5l0j-a1-m1-cA_5l0j-a1-m1-cB
83 5l0j-a1-m1-cB 166 31 0.1429 0.0602 0.3226 6.3 5l0j-a1-m1-cA_5l0j-a1-m1-cB
84 7nh9-a1-m1-cE 327 66 0.2714 0.0581 0.2879 6.6 7nh9-a1-m1-cD_7nh9-a1-m1-cE
85 7nh9-a1-m1-cD 327 66 0.2714 0.0581 0.2879 6.6 7nh9-a1-m1-cD_7nh9-a1-m1-cE
86 1qsd-a1-m1-cB 102 69 0.3143 0.2157 0.3188 7.5 1qsd-a1-m1-cA_1qsd-a1-m1-cB
87 1qsd-a1-m1-cA 102 69 0.3143 0.2157 0.3188 7.5 1qsd-a1-m1-cA_1qsd-a1-m1-cB
88 3nyn-a3-m1-cB 553 48 0.2286 0.0289 0.3333 10.0 3nyn-a3-m1-cA_3nyn-a3-m1-cB
89 3nyn-a3-m1-cA 553 48 0.2286 0.0289 0.3333 10.0 3nyn-a3-m1-cA_3nyn-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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