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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
TDFLAGIRIVGEDKNGTNQITGVISKFDTNIRTIVLNAKDGIFTCNLIFVKNTDKLTTLD
KLRKVQGVFTVERL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ibw-a1-m1-cA 76 74 1.0000 0.9737 1.0000 6.62e-47 3ibw-a1-m1-cB_3ibw-a1-m1-cA
2 3ibw-a1-m1-cB 74 74 1.0000 1.0000 1.0000 7.79e-47 3ibw-a1-m1-cB_3ibw-a1-m1-cA
3 4zoc-a1-m1-cB 724 28 0.1622 0.0166 0.4286 1.1 4zoc-a1-m1-cA_4zoc-a1-m1-cB
4 4zoc-a1-m1-cA 724 28 0.1622 0.0166 0.4286 1.1 4zoc-a1-m1-cA_4zoc-a1-m1-cB
5 5z70-a2-m3-cB 538 31 0.1486 0.0204 0.3548 1.5 5z70-a2-m1-cB_5z70-a2-m3-cB
6 5z70-a2-m1-cB 538 31 0.1486 0.0204 0.3548 1.5 5z70-a2-m1-cB_5z70-a2-m3-cB
7 6u9h-a1-m1-cR 155 67 0.2703 0.1290 0.2985 3.2 6u9h-a1-m1-cN_6u9h-a1-m1-cR
8 6u9h-a1-m1-cN 155 67 0.2703 0.1290 0.2985 3.2 6u9h-a1-m1-cN_6u9h-a1-m1-cR
9 2yz2-a2-m2-cA 266 57 0.2162 0.0602 0.2807 9.5 2yz2-a2-m2-cB_2yz2-a2-m2-cA
10 2yz2-a2-m1-cA 266 57 0.2162 0.0602 0.2807 9.5 2yz2-a2-m2-cB_2yz2-a2-m1-cA
11 2yz2-a1-m2-cA 266 57 0.2162 0.0602 0.2807 9.5 2yz2-a1-m4-cB_2yz2-a1-m2-cA
12 2yz2-a2-m2-cB 263 57 0.2162 0.0608 0.2807 9.6 2yz2-a2-m2-cB_2yz2-a2-m1-cA, 2yz2-a2-m2-cB_2yz2-a2-m2-cA
13 2yz2-a1-m4-cB 263 57 0.2162 0.0608 0.2807 9.6 2yz2-a1-m1-cB_2yz2-a1-m4-cB, 2yz2-a1-m4-cB_2yz2-a1-m2-cA
14 2yz2-a1-m1-cB 263 57 0.2162 0.0608 0.2807 9.6 2yz2-a1-m1-cB_2yz2-a1-m4-cB

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Reference:
Jacob Schwartz et al.

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