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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
TDKRKQSLYFPEEMLKEIQEEATRQDRSLSWVVQQAWKIARERIKSFPAVNDVTG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6sbx-a1-m2-cC 55 55 1.0000 1.0000 1.0000 1.20e-35 6sbx-a1-m1-cC_6sbx-a1-m2-cC
2 6sbx-a1-m1-cC 55 55 1.0000 1.0000 1.0000 1.20e-35 6sbx-a1-m1-cB_6sbx-a1-m1-cC, 6sbx-a1-m1-cC_6sbx-a1-m2-cC
3 6sbx-a1-m1-cB 48 48 0.8727 1.0000 1.0000 1.61e-29 6sbx-a1-m1-cB_6sbx-a1-m1-cC
4 3pui-a1-m2-cA 574 25 0.1818 0.0174 0.4000 0.37 3pui-a1-m1-cA_3pui-a1-m2-cA
5 3pui-a1-m1-cA 574 25 0.1818 0.0174 0.4000 0.37 3pui-a1-m1-cA_3pui-a1-m2-cA
6 8edv-a2-m1-cD 309 48 0.2545 0.0453 0.2917 3.3 8edv-a2-m1-cD_8edv-a2-m1-cC
7 5uco-a1-m1-cB 377 41 0.3091 0.0451 0.4146 4.1 5uco-a1-m1-cA_5uco-a1-m1-cB
8 5uco-a1-m1-cA 377 41 0.3091 0.0451 0.4146 4.1 5uco-a1-m1-cA_5uco-a1-m1-cB
9 4c65-a2-m3-cH 429 21 0.2182 0.0280 0.5714 4.4 4c65-a2-m3-cH_4c65-a2-m1-cE, 4c65-a2-m3-cH_4c65-a2-m3-cG
10 4c65-a1-m2-cC 433 21 0.2182 0.0277 0.5714 4.4 4c65-a1-m2-cC_4c65-a1-m2-cA
11 4c65-a1-m2-cA 436 21 0.2182 0.0275 0.5714 4.4 4c65-a1-m2-cC_4c65-a1-m2-cA
12 4c65-a2-m1-cE 435 21 0.2182 0.0276 0.5714 4.5 4c65-a2-m3-cH_4c65-a2-m1-cE
13 4c65-a2-m3-cG 431 21 0.2182 0.0278 0.5714 4.5 4c65-a2-m3-cH_4c65-a2-m3-cG
14 2gpe-a2-m1-cC 46 19 0.1636 0.1957 0.4737 5.5 2gpe-a2-m1-cC_2gpe-a2-m1-cD
15 2gpe-a2-m1-cD 48 19 0.1636 0.1875 0.4737 6.0 2gpe-a2-m1-cC_2gpe-a2-m1-cD
16 6qgm-a2-m1-cd 526 31 0.2000 0.0209 0.3548 9.1 6qgm-a2-m1-cf_6qgm-a2-m1-cd
17 6qgm-a2-m1-cf 525 31 0.2000 0.0210 0.3548 9.3 6qgm-a2-m1-cf_6qgm-a2-m1-cd

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Reference:
Jacob Schwartz et al.

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