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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
TDLLISRMPFARLVKEVTDQLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMR
KDMQLARRIRG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yfw-a2-m1-cC 71 71 1.0000 1.0000 1.0000 7.94e-47 2yfw-a2-m1-cC_2yfw-a2-m1-cE
2 2yfw-a2-m1-cE 88 74 1.0000 0.8068 0.9595 1.23e-44 2yfw-a2-m1-cC_2yfw-a2-m1-cE
3 6uph-a1-m1-cA 93 78 0.9437 0.7204 0.8590 4.06e-42 6uph-a1-m1-cA_6uph-a1-m1-cE
4 6uph-a1-m1-cE 97 78 0.9437 0.6907 0.8590 4.10e-42 6uph-a1-m1-cA_6uph-a1-m1-cE
5 8f86-a1-m1-cE 95 76 0.7324 0.5474 0.6842 1.81e-29 8f86-a1-m1-cE_8f86-a1-m1-cA
6 8f86-a1-m1-cA 107 76 0.7324 0.4860 0.6842 2.75e-29 8f86-a1-m1-cE_8f86-a1-m1-cA
7 7z0o-a1-m1-cC 97 76 0.6620 0.4845 0.6184 9.04e-26 7z0o-a1-m1-cA_7z0o-a1-m1-cC
8 5ay8-a1-m1-cE 96 74 0.6479 0.4792 0.6216 9.29e-26 5ay8-a1-m1-cE_5ay8-a1-m1-cA
9 4jjn-a1-m1-cE 96 76 0.6620 0.4896 0.6184 9.39e-26 4jjn-a1-m1-cE_4jjn-a1-m1-cA
10 5ay8-a1-m1-cA 97 74 0.6479 0.4742 0.6216 9.76e-26 5ay8-a1-m1-cE_5ay8-a1-m1-cA
11 4jjn-a1-m1-cA 98 76 0.6620 0.4796 0.6184 9.82e-26 4jjn-a1-m1-cE_4jjn-a1-m1-cA
12 7z0o-a1-m1-cA 94 76 0.6620 0.5000 0.6184 9.92e-26 7z0o-a1-m1-cA_7z0o-a1-m1-cC
13 5zbx-a1-m1-cA 95 74 0.6197 0.4632 0.5946 5.88e-25 5zbx-a1-m1-cA_5zbx-a1-m1-cE
14 5zbx-a1-m1-cE 101 77 0.6197 0.4356 0.5714 1.86e-24 5zbx-a1-m1-cA_5zbx-a1-m1-cE
15 6kxv-a1-m1-cA 94 75 0.6338 0.4787 0.6000 4.63e-24 6kxv-a1-m1-cA_6kxv-a1-m1-cE
16 7y7i-a1-m1-cE 97 77 0.6056 0.4433 0.5584 5.61e-24 7y7i-a1-m1-cE_7y7i-a1-m1-cA
17 6kxv-a1-m1-cE 95 75 0.6338 0.4737 0.6000 5.93e-24 6kxv-a1-m1-cA_6kxv-a1-m1-cE
18 7y7i-a1-m1-cA 102 77 0.6056 0.4216 0.5584 8.00e-24 7y7i-a1-m1-cE_7y7i-a1-m1-cA
19 7d69-a1-m1-cA 90 75 0.4930 0.3889 0.4667 2.16e-19 7d69-a1-m1-cA_7d69-a1-m1-cE
20 7d69-a1-m1-cE 99 75 0.4930 0.3535 0.4667 2.62e-19 7d69-a1-m1-cA_7d69-a1-m1-cE
21 6xwt-a1-m1-cC 74 68 0.3521 0.3378 0.3676 8.08e-08 6xwt-a1-m1-cA_6xwt-a1-m1-cC
22 6xwt-a1-m1-cA 74 68 0.3521 0.3378 0.3676 8.08e-08 6xwt-a1-m1-cA_6xwt-a1-m1-cC
23 2xkp-a2-m1-cD 207 21 0.1408 0.0483 0.4762 7.9 2xkp-a2-m1-cD_2xkp-a2-m1-cE
24 2xkp-a3-m1-cF 196 21 0.1408 0.0510 0.4762 8.0 2xkp-a3-m1-cC_2xkp-a3-m1-cF
25 2xkp-a3-m1-cC 196 21 0.1408 0.0510 0.4762 8.0 2xkp-a3-m1-cC_2xkp-a3-m1-cF
26 1xk6-a2-m1-cD 386 53 0.2676 0.0492 0.3585 8.9 1xk6-a2-m1-cB_1xk6-a2-m1-cD
27 1xk6-a2-m1-cB 386 53 0.2676 0.0492 0.3585 8.9 1xk6-a2-m1-cB_1xk6-a2-m1-cD
28 2xkp-a2-m1-cE 211 21 0.1408 0.0474 0.4762 8.9 2xkp-a2-m1-cD_2xkp-a2-m1-cE
29 7lv9-a1-m1-cE 102 70 0.2676 0.1863 0.2714 9.0 7lv9-a1-m1-cA_7lv9-a1-m1-cE
30 7lv9-a1-m1-cA 102 70 0.2676 0.1863 0.2714 9.0 7lv9-a1-m1-cA_7lv9-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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