Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
TDQERTLLGLLSEGLTNKQIADRMFLAEKTVKNYVSRLLAKLGMERRTQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3c57-a1-m1-cB 49 49 1.0000 1.0000 1.0000 1.20e-29 3c57-a1-m1-cB_3c57-a1-m1-cA
2 3c57-a1-m1-cA 51 49 1.0000 0.9608 1.0000 1.50e-29 3c57-a1-m1-cB_3c57-a1-m1-cA
3 3c3w-a1-m1-cB 210 49 1.0000 0.2333 1.0000 1.79e-28 3c3w-a1-m1-cB_3c3w-a1-m1-cA
4 3c3w-a1-m1-cA 211 49 1.0000 0.2322 1.0000 1.94e-28 3c3w-a1-m1-cB_3c3w-a1-m1-cA
5 1zlj-a4-m1-cG 67 49 0.9592 0.7015 0.9592 2.92e-24 1zlj-a4-m1-cH_1zlj-a4-m1-cG
6 1zlj-a4-m1-cH 64 49 0.9592 0.7344 0.9592 3.80e-24 1zlj-a4-m1-cH_1zlj-a4-m1-cG
7 4wuh-a1-m1-cB 68 49 0.4694 0.3382 0.4694 4.01e-11 4wuh-a1-m1-cA_4wuh-a1-m1-cB
8 4wuh-a1-m1-cA 68 49 0.4694 0.3382 0.4694 4.01e-11 4wuh-a1-m1-cA_4wuh-a1-m1-cB
9 5hev-a2-m1-cB 209 49 0.5306 0.1244 0.5306 6.30e-11 5hev-a2-m1-cB_5hev-a2-m1-cC
10 5hev-a2-m1-cC 210 49 0.5306 0.1238 0.5306 6.43e-11 5hev-a2-m1-cB_5hev-a2-m1-cC
11 7x1k-a1-m1-cB 68 49 0.4490 0.3235 0.4490 3.50e-09 7x1k-a1-m1-cB_7x1k-a1-m1-cA
12 7x1k-a1-m1-cA 69 49 0.4490 0.3188 0.4490 3.65e-09 7x1k-a1-m1-cB_7x1k-a1-m1-cA
13 1fse-a2-m1-cC 67 49 0.4286 0.3134 0.4286 1.24e-08 1fse-a2-m1-cF_1fse-a2-m1-cC
14 1fse-a3-m1-cD 66 49 0.4286 0.3182 0.4286 1.31e-08 1fse-a3-m1-cE_1fse-a3-m1-cD
15 1fse-a3-m1-cE 64 49 0.4286 0.3281 0.4286 1.46e-08 1fse-a3-m1-cE_1fse-a3-m1-cD
16 4zms-a1-m1-cA 207 49 0.4082 0.0966 0.4082 3.44e-08 4zms-a1-m1-cB_4zms-a1-m1-cA
17 4zms-a1-m1-cB 200 49 0.4082 0.1000 0.4082 3.46e-08 4zms-a1-m1-cB_4zms-a1-m1-cA
18 4if4-a3-m1-cC 208 49 0.4082 0.0962 0.4082 4.86e-06 4if4-a3-m1-cB_4if4-a3-m1-cC
19 4if4-a3-m1-cB 208 49 0.4082 0.0962 0.4082 4.86e-06 4if4-a3-m1-cB_4if4-a3-m1-cC
20 4if4-a1-m1-cD 208 49 0.4082 0.0962 0.4082 4.86e-06 4if4-a1-m1-cB_4if4-a1-m1-cD
21 4if4-a1-m1-cB 208 49 0.4082 0.0962 0.4082 4.86e-06 4if4-a1-m1-cA_4if4-a1-m1-cB, 4if4-a1-m1-cB_4if4-a1-m1-cD
22 4if4-a1-m1-cA 208 49 0.4082 0.0962 0.4082 4.86e-06 4if4-a1-m1-cA_4if4-a1-m1-cB
23 4ldz-a1-m1-cB 188 49 0.3673 0.0957 0.3673 2.27e-05 4ldz-a1-m1-cB_4ldz-a1-m1-cA
24 4ldz-a1-m1-cA 196 49 0.3673 0.0918 0.3673 2.31e-05 4ldz-a1-m1-cB_4ldz-a1-m1-cA
25 3klo-a1-m1-cA 217 49 0.3469 0.0783 0.3469 2.68e-05 3klo-a1-m2-cB_3klo-a1-m1-cA
26 3klo-a1-m2-cB 216 49 0.3469 0.0787 0.3469 2.78e-05 3klo-a1-m2-cB_3klo-a1-m1-cA
27 1rnl-a3-m2-cA 200 35 0.3469 0.0850 0.4857 2.84e-04 1rnl-a3-m1-cA_1rnl-a3-m2-cA
28 1rnl-a3-m1-cA 200 35 0.3469 0.0850 0.4857 2.84e-04 1rnl-a3-m1-cA_1rnl-a3-m2-cA
29 1rnl-a2-m4-cA 200 35 0.3469 0.0850 0.4857 2.84e-04 1rnl-a2-m2-cA_1rnl-a2-m4-cA
30 1rnl-a2-m2-cA 200 35 0.3469 0.0850 0.4857 2.84e-04 1rnl-a2-m2-cA_1rnl-a2-m4-cA
31 2krf-a1-m1-cB 69 49 0.2857 0.2029 0.2857 0.006 2krf-a1-m1-cA_2krf-a1-m1-cB
32 2krf-a1-m1-cA 69 49 0.2857 0.2029 0.2857 0.006 2krf-a1-m1-cA_2krf-a1-m1-cB
33 7vim-a1-m1-cA 64 42 0.3265 0.2500 0.3810 0.10 7vim-a1-m1-cA_7vim-a1-m2-cB
34 7vim-a1-m2-cB 67 42 0.3265 0.2388 0.3810 0.10 7vim-a1-m1-cA_7vim-a1-m2-cB
35 3clo-a2-m2-cC 248 44 0.2449 0.0484 0.2727 0.20 3clo-a2-m1-cC_3clo-a2-m2-cC
36 3clo-a2-m1-cC 248 44 0.2449 0.0484 0.2727 0.20 3clo-a2-m1-cC_3clo-a2-m2-cC
37 1je8-a2-m1-cF 63 30 0.2857 0.2222 0.4667 0.25 1je8-a2-m1-cF_1je8-a2-m1-cE
38 1je8-a2-m1-cE 64 30 0.2857 0.2188 0.4667 0.28 1je8-a2-m1-cF_1je8-a2-m1-cE
39 6ide-a1-m1-cA 226 49 0.3469 0.0752 0.3469 0.33 6ide-a1-m1-cA_6ide-a1-m1-cB
40 6kju-a1-m1-cB 227 49 0.3469 0.0749 0.3469 0.39 6kju-a1-m1-cA_6kju-a1-m1-cB
41 6ide-a1-m1-cB 228 49 0.3469 0.0746 0.3469 0.39 6ide-a1-m1-cA_6ide-a1-m1-cB
42 6kju-a1-m1-cA 221 49 0.3469 0.0769 0.3469 0.40 6kju-a1-m1-cA_6kju-a1-m1-cB
43 6zj2-a3-m1-cM 179 43 0.2653 0.0726 0.3023 2.5 6zj2-a3-m1-cL_6zj2-a3-m1-cM
44 4y15-a2-m2-cB 237 49 0.2653 0.0549 0.2653 4.0 4y15-a2-m1-cB_4y15-a2-m2-cB
45 4y15-a2-m1-cB 237 49 0.2653 0.0549 0.2653 4.0 4y15-a2-m1-cB_4y15-a2-m2-cB
46 6zj2-a3-m1-cL 166 43 0.2653 0.0783 0.3023 4.2 6zj2-a3-m1-cL_6zj2-a3-m1-cM
47 1fse-a2-m1-cF 50 25 0.1837 0.1800 0.3600 4.7 1fse-a2-m1-cF_1fse-a2-m1-cC
48 7dd0-a2-m1-cD 241 54 0.4082 0.0830 0.3704 6.1 7dd0-a2-m1-cD_7dd0-a2-m1-cB
49 4j2n-a1-m1-cE 54 19 0.1633 0.1481 0.4211 8.0 4j2n-a1-m1-cB_4j2n-a1-m1-cE, 4j2n-a1-m1-cD_4j2n-a1-m1-cE
50 4j2n-a1-m1-cD 54 19 0.1633 0.1481 0.4211 8.0 4j2n-a1-m1-cB_4j2n-a1-m1-cD, 4j2n-a1-m1-cD_4j2n-a1-m1-cE
51 4j2n-a1-m1-cB 54 19 0.1633 0.1481 0.4211 8.0 4j2n-a1-m1-cB_4j2n-a1-m1-cC, 4j2n-a1-m1-cB_4j2n-a1-m1-cD, 4j2n-a1-m1-cB_4j2n-a1-m1-cE
52 7dd0-a2-m1-cB 260 54 0.4082 0.0769 0.3704 8.3 7dd0-a2-m1-cD_7dd0-a2-m1-cB
53 4j2n-a1-m1-cC 56 19 0.1633 0.1429 0.4211 8.4 4j2n-a1-m1-cB_4j2n-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600