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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
TEACVTSWLWSEGEGAVFYRVDLHFTNLGTPPLDEDGRWDPALMYNPCGPEPPAHVVRAY
NQPAGDVRGVWGKGERTYAEQDFRVGGTRWHRLLRMPVR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4har-a2-m1-cD 99 99 1.0000 1.0000 1.0000 4.72e-71 4har-a2-m1-cD_4har-a2-m1-cC
2 4har-a2-m1-cC 100 98 0.9899 0.9800 1.0000 2.95e-70 4har-a2-m1-cD_4har-a2-m1-cC
3 4hbo-a2-m3-cB 75 93 0.7475 0.9867 0.7957 1.02e-46 4hbo-a2-m1-cB_4hbo-a2-m3-cB
4 4hbo-a2-m1-cB 75 93 0.7475 0.9867 0.7957 1.02e-46 4hbo-a2-m1-cB_4hbo-a2-m3-cB
5 2oi2-a1-m2-cA 285 41 0.1111 0.0386 0.2683 0.90 2oi2-a1-m1-cA_2oi2-a1-m2-cA
6 2oi2-a1-m1-cA 285 41 0.1111 0.0386 0.2683 0.90 2oi2-a1-m1-cA_2oi2-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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