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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
TEILKSIDNEWRKTQCMPREVAIDVGKEFGVATNTFFKPPCVSVYRCGGCCNSEGLQCMN
TSTSYLSKTLFEITVPLSQGPKPVTISFANHTSCRCMS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2x1w-a1-m1-cA 98 98 1.0000 1.0000 1.0000 1.87e-70 2x1w-a1-m1-cA_2x1w-a1-m1-cB
2 2x1w-a1-m1-cB 98 97 0.9898 0.9898 1.0000 8.69e-70 2x1w-a1-m1-cA_2x1w-a1-m1-cB
3 2xv7-a1-m2-cA 104 96 0.6327 0.5962 0.6458 1.37e-44 2xv7-a1-m1-cA_2xv7-a1-m2-cA
4 2xv7-a1-m1-cA 104 96 0.6327 0.5962 0.6458 1.37e-44 2xv7-a1-m1-cA_2xv7-a1-m2-cA
5 3v6b-a1-m2-cA 94 85 0.2959 0.3085 0.3412 8.80e-13 3v6b-a1-m1-cA_3v6b-a1-m2-cA
6 3v6b-a1-m1-cA 94 85 0.2959 0.3085 0.3412 8.80e-13 3v6b-a1-m1-cA_3v6b-a1-m2-cA
7 1fzv-a1-m1-cB 100 86 0.2857 0.2800 0.3256 1.30e-12 1fzv-a1-m1-cA_1fzv-a1-m1-cB
8 1fzv-a1-m1-cA 100 86 0.2857 0.2800 0.3256 1.30e-12 1fzv-a1-m1-cA_1fzv-a1-m1-cB
9 1wq8-a2-m8-cA 99 84 0.2551 0.2525 0.2976 1.07e-11 1wq8-a2-m3-cA_1wq8-a2-m8-cA, 1wq8-a2-m5-cA_1wq8-a2-m8-cA
10 1wq8-a2-m5-cA 99 84 0.2551 0.2525 0.2976 1.07e-11 1wq8-a2-m5-cA_1wq8-a2-m8-cA
11 1wq8-a2-m3-cA 99 84 0.2551 0.2525 0.2976 1.07e-11 1wq8-a2-m3-cA_1wq8-a2-m8-cA
12 2c7w-a1-m1-cB 95 95 0.3265 0.3368 0.3368 1.25e-11 2c7w-a1-m1-cA_2c7w-a1-m1-cB
13 2c7w-a1-m1-cA 95 95 0.3265 0.3368 0.3368 1.25e-11 2c7w-a1-m1-cA_2c7w-a1-m1-cB
14 1wq9-a1-m1-cA 96 86 0.2347 0.2396 0.2674 1.83e-10 1wq9-a1-m1-cB_1wq9-a1-m1-cA
15 1wq9-a1-m1-cB 95 86 0.2347 0.2421 0.2674 2.02e-10 1wq9-a1-m1-cB_1wq9-a1-m1-cA
16 3mjg-a2-m1-cA 97 86 0.2653 0.2680 0.3023 8.04e-09 3mjg-a2-m1-cA_3mjg-a2-m1-cB
17 3mjg-a2-m1-cB 101 86 0.2653 0.2574 0.3023 1.07e-08 3mjg-a2-m1-cA_3mjg-a2-m1-cB
18 1pdg-a2-m2-cC 86 60 0.2143 0.2442 0.3500 1.16e-07 1pdg-a2-m1-cC_1pdg-a2-m2-cC
19 1pdg-a2-m1-cC 86 60 0.2143 0.2442 0.3500 1.16e-07 1pdg-a2-m1-cC_1pdg-a2-m2-cC
20 3mjk-a3-m1-cX 121 69 0.2041 0.1653 0.2899 7.62e-06 3mjk-a3-m1-cX_3mjk-a3-m1-cY
21 3mjk-a3-m1-cY 129 69 0.2041 0.1550 0.2899 9.71e-06 3mjk-a3-m1-cX_3mjk-a3-m1-cY
22 3nnk-a4-m1-cS 409 54 0.1633 0.0391 0.2963 1.1 3nnk-a4-m1-cO_3nnk-a4-m1-cS, 3nnk-a4-m1-cP_3nnk-a4-m1-cS, 3nnk-a4-m1-cR_3nnk-a4-m1-cS
23 3nnk-a4-m1-cR 409 54 0.1633 0.0391 0.2963 1.1 3nnk-a4-m1-cR_3nnk-a4-m1-cS
24 3nnk-a4-m1-cP 409 54 0.1633 0.0391 0.2963 1.1 3nnk-a4-m1-cP_3nnk-a4-m1-cS
25 3nnk-a4-m1-cO 409 54 0.1633 0.0391 0.2963 1.1 3nnk-a4-m1-cO_3nnk-a4-m1-cS

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Reference:
Jacob Schwartz et al.

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