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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
TFEEMALTTFMITKESYCKLKNSVSDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQLA
KAMETFNHNNGNDVLYQPPTASVTT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vc8-a1-m1-cB 85 85 1.0000 1.0000 1.0000 4.08e-60 3vc8-a1-m1-cA_3vc8-a1-m1-cB
2 3vcb-a1-m1-cB 89 85 0.9882 0.9438 0.9882 5.22e-59 3vcb-a1-m1-cA_3vcb-a1-m1-cB
3 3vcb-a1-m1-cA 89 85 0.9882 0.9438 0.9882 5.22e-59 3vcb-a1-m1-cA_3vcb-a1-m1-cB
4 3vc8-a1-m1-cA 81 81 0.9529 1.0000 1.0000 2.44e-57 3vc8-a1-m1-cA_3vc8-a1-m1-cB
5 3gzf-a1-m1-cC 92 83 0.4118 0.3804 0.4217 6.96e-14 3gzf-a1-m1-cC_3gzf-a1-m1-cA
6 3gzf-a1-m1-cA 96 85 0.4118 0.3646 0.4118 7.03e-14 3gzf-a1-m1-cC_3gzf-a1-m1-cA
7 7lzj-a1-m1-cC 716 38 0.1412 0.0168 0.3158 1.8 7lzj-a1-m1-cB_7lzj-a1-m1-cC
8 7lzj-a1-m1-cB 716 38 0.1412 0.0168 0.3158 1.8 7lzj-a1-m1-cB_7lzj-a1-m1-cC
9 7t63-a1-m1-cA 325 41 0.1412 0.0369 0.2927 2.6 7t63-a1-m1-cA_7t63-a1-m1-cB
10 7t63-a1-m1-cB 334 41 0.1412 0.0359 0.2927 2.6 7t63-a1-m1-cA_7t63-a1-m1-cB
11 2j2f-a3-m1-cE 347 18 0.1176 0.0288 0.5556 3.8 2j2f-a3-m1-cD_2j2f-a3-m1-cE
12 2j2f-a3-m1-cD 347 18 0.1176 0.0288 0.5556 3.8 2j2f-a3-m1-cD_2j2f-a3-m1-cE
13 2uw1-a1-m1-cB 338 18 0.1176 0.0296 0.5556 4.7 2uw1-a1-m1-cA_2uw1-a1-m1-cB
14 2uw1-a1-m1-cA 327 18 0.1176 0.0306 0.5556 5.1 2uw1-a1-m1-cA_2uw1-a1-m1-cB
15 6m10-a3-m3-cD 81 40 0.1529 0.1605 0.3250 9.6 6m10-a3-m1-cD_6m10-a3-m3-cD
16 6m10-a3-m1-cD 81 40 0.1529 0.1605 0.3250 9.6 6m10-a3-m1-cD_6m10-a3-m3-cD

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Reference:
Jacob Schwartz et al.

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