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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
TFETVRNTIRIESEVDESLRQLCHEERITKETWLEAAYLYLCEKPEELAQVIQLAQERLS
QRKAIADYKRAKTQERFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6noy-a4-m1-cA 79 78 1.0000 0.9873 1.0000 1.64e-51 6noy-a4-m3-cB_6noy-a4-m1-cA
2 6noy-a2-m1-cA 79 78 1.0000 0.9873 1.0000 1.64e-51 6noy-a2-m1-cB_6noy-a2-m1-cA
3 6noy-a4-m3-cB 78 78 1.0000 1.0000 1.0000 1.68e-51 6noy-a4-m3-cB_6noy-a4-m1-cA
4 6noy-a2-m1-cB 78 78 1.0000 1.0000 1.0000 1.68e-51 6noy-a2-m1-cB_6noy-a2-m1-cA
5 3ov2-a2-m1-cC 392 43 0.1538 0.0306 0.2791 4.9 3ov2-a2-m1-cD_3ov2-a2-m1-cC
6 3ov2-a2-m1-cD 389 43 0.1538 0.0308 0.2791 5.0 3ov2-a2-m1-cD_3ov2-a2-m1-cC
7 4ki8-a1-m1-cC 524 31 0.1795 0.0267 0.4516 5.7 4ki8-a1-m1-cB_4ki8-a1-m1-cC
8 4ki8-a1-m1-cB 524 31 0.1795 0.0267 0.4516 5.7 4ki8-a1-m1-cB_4ki8-a1-m1-cC
9 2eu1-a1-m2-cG 524 31 0.1795 0.0267 0.4516 5.7 2eu1-a1-m1-cD_2eu1-a1-m2-cG
10 2eu1-a1-m1-cD 524 31 0.1795 0.0267 0.4516 5.7 2eu1-a1-m1-cD_2eu1-a1-m2-cG
11 4v43-a2-m1-cU 525 31 0.1795 0.0267 0.4516 5.7 4v43-a2-m1-c1_4v43-a2-m1-cU
12 4v43-a2-m1-c1 525 31 0.1795 0.0267 0.4516 5.7 4v43-a2-m1-c1_4v43-a2-m1-cU
13 7rgv-a1-m3-cA 222 38 0.1923 0.0676 0.3947 5.8 7rgv-a1-m2-cA_7rgv-a1-m3-cA
14 7rgv-a1-m2-cA 222 38 0.1923 0.0676 0.3947 5.8 7rgv-a1-m2-cA_7rgv-a1-m3-cA
15 5opw-a1-m1-cL 524 31 0.1795 0.0267 0.4516 6.0 5opw-a1-m1-cB_5opw-a1-m1-cL
16 5opw-a1-m1-cJ 524 31 0.1795 0.0267 0.4516 6.0 5opw-a1-m1-cI_5opw-a1-m1-cJ
17 5opw-a1-m1-cI 524 31 0.1795 0.0267 0.4516 6.0 5opw-a1-m1-cI_5opw-a1-m1-cJ
18 5opw-a1-m1-cB 524 31 0.1795 0.0267 0.4516 6.0 5opw-a1-m1-cB_5opw-a1-m1-cL
19 4pkn-a1-m1-cL 524 31 0.1795 0.0267 0.4516 6.0 4pkn-a1-m1-cE_4pkn-a1-m1-cL
20 4pkn-a1-m1-cE 524 31 0.1795 0.0267 0.4516 6.0 4pkn-a1-m1-cE_4pkn-a1-m1-cL
21 1pcq-a1-m1-cH 524 31 0.1795 0.0267 0.4516 6.0 1pcq-a1-m1-cA_1pcq-a1-m1-cH, 1pcq-a1-m1-cB_1pcq-a1-m1-cH
22 1pcq-a1-m1-cD 524 31 0.1795 0.0267 0.4516 6.0 1pcq-a1-m1-cC_1pcq-a1-m1-cD
23 1pcq-a1-m1-cC 524 31 0.1795 0.0267 0.4516 6.0 1pcq-a1-m1-cC_1pcq-a1-m1-cD
24 1pcq-a1-m1-cB 524 31 0.1795 0.0267 0.4516 6.0 1pcq-a1-m1-cB_1pcq-a1-m1-cH
25 1pcq-a1-m1-cA 524 31 0.1795 0.0267 0.4516 6.0 1pcq-a1-m1-cA_1pcq-a1-m1-cH
26 4ab2-a1-m1-cN 523 31 0.1795 0.0268 0.4516 6.5 4ab2-a1-m1-cG_4ab2-a1-m1-cN
27 4ab2-a1-m1-cG 523 31 0.1795 0.0268 0.4516 6.5 4ab2-a1-m1-cG_4ab2-a1-m1-cN
28 4aar-a1-m1-cG 523 31 0.1795 0.0268 0.4516 6.5 4aar-a1-m1-cF_4aar-a1-m1-cG
29 4aar-a1-m1-cF 523 31 0.1795 0.0268 0.4516 6.5 4aar-a1-m1-cF_4aar-a1-m1-cG
30 4ova-a1-m1-cC 199 53 0.2051 0.0804 0.3019 8.0 4ova-a1-m1-cC_4ova-a1-m1-cB, 4ova-a1-m1-cC_4ova-a1-m1-cD
31 4ova-a1-m1-cD 200 53 0.2051 0.0800 0.3019 8.0 4ova-a1-m1-cA_4ova-a1-m1-cD, 4ova-a1-m1-cC_4ova-a1-m1-cD
32 4ova-a1-m1-cB 200 53 0.2051 0.0800 0.3019 8.0 4ova-a1-m1-cA_4ova-a1-m1-cB, 4ova-a1-m1-cC_4ova-a1-m1-cB
33 4ova-a1-m1-cA 200 53 0.2051 0.0800 0.3019 8.0 4ova-a1-m1-cA_4ova-a1-m1-cB, 4ova-a1-m1-cA_4ova-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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