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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
TFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAM
DSMQGQDLNGRPLRINWAA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3md3-a2-m2-cA 165 79 1.0000 0.4788 1.0000 5.64e-55 3md3-a2-m1-cA_3md3-a2-m2-cA
2 3md3-a2-m2-cA 165 75 0.2405 0.1152 0.2533 6.08e-04 3md3-a2-m1-cA_3md3-a2-m2-cA
3 3md3-a2-m1-cA 165 79 1.0000 0.4788 1.0000 5.64e-55 3md3-a2-m1-cA_3md3-a2-m2-cA
4 3md3-a2-m1-cA 165 75 0.2405 0.1152 0.2533 6.08e-04 3md3-a2-m1-cA_3md3-a2-m2-cA
5 3md1-a4-m5-cB 79 79 1.0000 1.0000 1.0000 6.29e-55 3md1-a4-m4-cB_3md1-a4-m5-cB
6 3md1-a4-m4-cB 79 79 1.0000 1.0000 1.0000 6.29e-55 3md1-a4-m4-cB_3md1-a4-m5-cB
7 3bs9-a3-m1-cB 79 77 0.4557 0.4557 0.4675 4.18e-15 3bs9-a3-m1-cA_3bs9-a3-m1-cB
8 3bs9-a3-m1-cA 79 77 0.4557 0.4557 0.4675 4.18e-15 3bs9-a3-m1-cA_3bs9-a3-m1-cB
9 6r5k-a1-m1-cF 165 73 0.3038 0.1455 0.3288 1.05e-09 6r5k-a1-m1-cF_6r5k-a1-m1-cH
10 6r5k-a1-m1-cF 165 76 0.3038 0.1455 0.3158 1.12e-07 6r5k-a1-m1-cF_6r5k-a1-m1-cH
11 6r5k-a1-m1-cD 390 73 0.3418 0.0692 0.3699 1.11e-09 6r5k-a1-m1-cD_6r5k-a1-m1-cH
12 6r5k-a1-m1-cD 390 73 0.3038 0.0615 0.3288 2.25e-09 6r5k-a1-m1-cD_6r5k-a1-m1-cH
13 6r5k-a1-m1-cD 390 76 0.2911 0.0590 0.3026 6.58e-07 6r5k-a1-m1-cD_6r5k-a1-m1-cH
14 6r5k-a1-m1-cD 390 76 0.3038 0.0615 0.3158 1.65e-06 6r5k-a1-m1-cD_6r5k-a1-m1-cH
15 6r5k-a1-m1-cH 394 73 0.3418 0.0685 0.3699 1.29e-09 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
16 6r5k-a1-m1-cH 394 73 0.3038 0.0609 0.3288 2.64e-09 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
17 6r5k-a1-m1-cH 394 76 0.2911 0.0584 0.3026 7.55e-07 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
18 6r5k-a1-m1-cH 394 76 0.3038 0.0609 0.3158 1.77e-06 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
19 5kw6-a1-m1-cA 201 79 0.3038 0.1194 0.3038 6.62e-08 5kw6-a1-m1-cB_5kw6-a1-m1-cA
20 5kw6-a1-m1-cA 201 73 0.2658 0.1045 0.2877 9.93e-07 5kw6-a1-m1-cB_5kw6-a1-m1-cA
21 5kw6-a1-m1-cB 198 79 0.3038 0.1212 0.3038 6.74e-08 5kw6-a1-m1-cB_5kw6-a1-m1-cA
22 5kw6-a1-m1-cB 198 73 0.2658 0.1061 0.2877 9.27e-07 5kw6-a1-m1-cB_5kw6-a1-m1-cA
23 6dcl-a1-m1-cB 171 74 0.3038 0.1404 0.3243 1.42e-07 6dcl-a1-m1-cB_6dcl-a1-m1-cA
24 6dcl-a1-m1-cA 182 74 0.3038 0.1319 0.3243 1.58e-07 6dcl-a1-m1-cB_6dcl-a1-m1-cA
25 6dcl-a1-m1-cA 182 52 0.1899 0.0824 0.2885 0.001 6dcl-a1-m1-cB_6dcl-a1-m1-cA
26 7wm3-a2-m1-cD 179 77 0.3038 0.1341 0.3117 8.52e-07 7wm3-a2-m1-cB_7wm3-a2-m1-cD
27 7wm3-a2-m1-cD 179 52 0.2152 0.0950 0.3269 5.91e-06 7wm3-a2-m1-cB_7wm3-a2-m1-cD
28 7wm3-a2-m1-cB 179 77 0.3038 0.1341 0.3117 8.52e-07 7wm3-a2-m1-cB_7wm3-a2-m1-cD
29 7wm3-a2-m1-cB 179 52 0.2152 0.0950 0.3269 5.91e-06 7wm3-a2-m1-cB_7wm3-a2-m1-cD
30 5iqq-a1-m1-cD 81 75 0.2785 0.2716 0.2933 1.07e-06 5iqq-a1-m1-cD_5iqq-a1-m1-cC
31 5iqq-a1-m1-cC 83 75 0.2785 0.2651 0.2933 1.09e-06 5iqq-a1-m1-cD_5iqq-a1-m1-cC
32 6gc5-a1-m1-cA 79 74 0.2532 0.2532 0.2703 6.61e-06 6gc5-a1-m1-cB_6gc5-a1-m1-cA
33 5ifn-a1-m1-cB 252 77 0.3038 0.0952 0.3117 2.29e-05 5ifn-a1-m1-cB_5ifn-a1-m1-cA
34 5ifn-a1-m1-cA 257 77 0.3038 0.0934 0.3117 2.31e-05 5ifn-a1-m1-cB_5ifn-a1-m1-cA
35 6es4-a1-m1-cA 206 48 0.2278 0.0874 0.3750 3.15e-05 6es4-a1-m1-cB_6es4-a1-m1-cA
36 6es4-a1-m1-cB 204 45 0.2278 0.0882 0.4000 3.16e-05 6es4-a1-m1-cB_6es4-a1-m1-cA
37 6gd1-a1-m1-cA 190 74 0.2532 0.1053 0.2703 3.87e-05 6gd1-a1-m1-cB_6gd1-a1-m1-cA
38 6gd1-a1-m1-cB 187 74 0.2532 0.1070 0.2703 4.10e-05 6gd1-a1-m1-cB_6gd1-a1-m1-cA
39 5t9p-a6-m1-cD 91 72 0.2658 0.2308 0.2917 4.81e-05 5t9p-a6-m1-cD_5t9p-a6-m1-cC
40 5t9p-a6-m1-cC 106 72 0.2658 0.1981 0.2917 7.33e-05 5t9p-a6-m1-cD_5t9p-a6-m1-cC
41 6dbp-a1-m1-cA 84 64 0.2911 0.2738 0.3594 7.96e-05 6dbp-a1-m1-cB_6dbp-a1-m1-cA
42 6dbp-a1-m1-cB 82 48 0.2278 0.2195 0.3750 8.72e-05 6dbp-a1-m1-cB_6dbp-a1-m1-cA
43 3nnc-a2-m4-cA 175 79 0.2911 0.1314 0.2911 3.52e-04 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
44 3nnc-a2-m3-cA 175 79 0.2911 0.1314 0.2911 3.52e-04 3nnc-a2-m3-cA_3nnc-a2-m4-cA
45 3nnc-a2-m2-cA 175 79 0.2911 0.1314 0.2911 3.52e-04 3nnc-a2-m2-cA_3nnc-a2-m4-cA
46 6fqr-a1-m1-cB 160 75 0.2532 0.1250 0.2667 0.002 6fqr-a1-m1-cA_6fqr-a1-m1-cB
47 6fqr-a1-m1-cA 158 75 0.2532 0.1266 0.2667 0.002 6fqr-a1-m1-cA_6fqr-a1-m1-cB
48 6gc5-a1-m1-cB 76 74 0.2405 0.2500 0.2568 0.002 6gc5-a1-m1-cB_6gc5-a1-m1-cA
49 3val-a1-m1-cI 172 77 0.2278 0.1047 0.2338 0.004 3val-a1-m1-cI_3val-a1-m1-cA
50 2g4b-a1-m2-cA 172 77 0.2278 0.1047 0.2338 0.004 2g4b-a1-m1-cA_2g4b-a1-m2-cA
51 2g4b-a1-m1-cA 172 77 0.2278 0.1047 0.2338 0.004 2g4b-a1-m1-cA_2g4b-a1-m2-cA
52 5ifm-a1-m1-cA 254 75 0.2532 0.0787 0.2667 0.004 5ifm-a1-m1-cA_5ifm-a1-m1-cB
53 5ifm-a1-m1-cB 259 75 0.2532 0.0772 0.2667 0.004 5ifm-a1-m1-cA_5ifm-a1-m1-cB
54 3val-a1-m1-cA 174 77 0.2278 0.1034 0.2338 0.004 3val-a1-m1-cI_3val-a1-m1-cA
55 3vai-a1-m1-cB 174 77 0.2278 0.1034 0.2338 0.004 3vai-a1-m1-cA_3vai-a1-m1-cB
56 3vai-a1-m1-cA 174 77 0.2278 0.1034 0.2338 0.004 3vai-a1-m1-cA_3vai-a1-m1-cB
57 5ca5-a1-m1-cB 248 79 0.2658 0.0847 0.2658 0.005 5ca5-a1-m1-cA_5ca5-a1-m1-cB
58 5ca5-a1-m1-cA 248 79 0.2658 0.0847 0.2658 0.005 5ca5-a1-m1-cA_5ca5-a1-m1-cB
59 7sp0-a1-m1-cB 244 75 0.2405 0.0779 0.2533 0.016 7sp0-a1-m1-cB_7sp0-a1-m1-cA
60 5det-a1-m1-cA 91 63 0.2405 0.2088 0.3016 0.016 5det-a1-m1-cA_5det-a1-m1-cB
61 7sp0-a1-m1-cA 253 75 0.2405 0.0751 0.2533 0.016 7sp0-a1-m1-cB_7sp0-a1-m1-cA
62 5det-a1-m1-cB 94 63 0.2405 0.2021 0.3016 0.017 5det-a1-m1-cA_5det-a1-m1-cB
63 5bjr-a2-m3-cB 84 64 0.2532 0.2381 0.3125 0.026 5bjr-a2-m1-cB_5bjr-a2-m3-cB
64 5bjr-a2-m1-cB 84 64 0.2532 0.2381 0.3125 0.026 5bjr-a2-m1-cB_5bjr-a2-m3-cB
65 5tkz-a1-m1-cB 89 64 0.2532 0.2247 0.3125 0.030 5tkz-a1-m1-cA_5tkz-a1-m1-cB
66 5tkz-a1-m1-cA 89 64 0.2532 0.2247 0.3125 0.030 5tkz-a1-m1-cA_5tkz-a1-m1-cB
67 1szo-a6-m1-cC 248 47 0.2152 0.0685 0.3617 0.058 1szo-a6-m1-cC_1szo-a6-m1-cA
68 1szo-a6-m1-cB 248 47 0.2152 0.0685 0.3617 0.058 1szo-a6-m1-cB_1szo-a6-m1-cF
69 1szo-a6-m1-cA 249 47 0.2152 0.0683 0.3617 0.059 1szo-a6-m1-cA_1szo-a6-m1-cD, 1szo-a6-m1-cC_1szo-a6-m1-cA
70 1szo-a6-m1-cD 251 47 0.2152 0.0677 0.3617 0.059 1szo-a6-m1-cA_1szo-a6-m1-cD
71 1szo-a6-m1-cF 248 47 0.2152 0.0685 0.3617 0.061 1szo-a6-m1-cB_1szo-a6-m1-cF
72 2jwn-a1-m1-cB 124 79 0.2405 0.1532 0.2405 0.14 2jwn-a1-m1-cA_2jwn-a1-m1-cB
73 2jwn-a1-m1-cA 124 79 0.2405 0.1532 0.2405 0.14 2jwn-a1-m1-cA_2jwn-a1-m1-cB
74 3ns6-a3-m1-cB 99 60 0.2025 0.1616 0.2667 0.19 3ns6-a3-m1-cA_3ns6-a3-m1-cB
75 3ns6-a3-m1-cA 99 60 0.2025 0.1616 0.2667 0.19 3ns6-a3-m1-cA_3ns6-a3-m1-cB
76 5cyj-a1-m1-cB 89 60 0.2278 0.2022 0.3000 0.23 5cyj-a1-m1-cA_5cyj-a1-m1-cB
77 5cyj-a1-m1-cA 89 60 0.2278 0.2022 0.3000 0.23 5cyj-a1-m1-cA_5cyj-a1-m1-cB
78 3b4d-a1-m2-cA 80 73 0.1519 0.1500 0.1644 0.43 3b4d-a1-m1-cA_3b4d-a1-m2-cA
79 3b4d-a1-m1-cA 80 73 0.1519 0.1500 0.1644 0.43 3b4d-a1-m1-cA_3b4d-a1-m2-cA
80 2i5m-a2-m2-cX 66 38 0.1646 0.1970 0.3421 0.63 2i5m-a2-m1-cX_2i5m-a2-m2-cX
81 2i5m-a2-m1-cX 66 38 0.1646 0.1970 0.3421 0.63 2i5m-a2-m1-cX_2i5m-a2-m2-cX
82 6ff7-a1-m1-cz 101 69 0.1899 0.1485 0.2174 1.0 6ff7-a1-m1-cN_6ff7-a1-m1-cz
83 6ff7-a1-m1-cN 101 69 0.1899 0.1485 0.2174 1.0 6ff7-a1-m1-cN_6ff7-a1-m1-cz
84 8aew-a1-m1-cB 537 53 0.1772 0.0261 0.2642 2.6 8aew-a1-m1-cB_8aew-a1-m1-cA
85 8aew-a1-m1-cA 542 53 0.1772 0.0258 0.2642 2.6 8aew-a1-m1-cB_8aew-a1-m1-cA
86 2wlh-a1-m4-cA 283 58 0.2405 0.0671 0.3276 9.3 2wlh-a1-m3-cA_2wlh-a1-m4-cA
87 2wlh-a1-m3-cA 283 58 0.2405 0.0671 0.3276 9.3 2wlh-a1-m3-cA_2wlh-a1-m4-cA

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Reference:
Jacob Schwartz et al.

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