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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
TFRMRIYERDDFRGQMSEITADCPSLQDRFHLTEVHSLNVLEGSWVLYEMPSYRGRQYLL
RPGEYRRYLDWGAMNAKVGSLRRVMD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1gam-a1-m1-cB 86 86 1.0000 1.0000 1.0000 5.21e-61 1gam-a1-m1-cA_1gam-a1-m1-cB
2 1gam-a1-m1-cA 86 86 1.0000 1.0000 1.0000 5.21e-61 1gam-a1-m1-cA_1gam-a1-m1-cB
3 1a45-a1-m2-cA 173 86 0.7442 0.3699 0.7442 4.38e-44 1a45-a1-m1-cA_1a45-a1-m2-cA
4 1a45-a1-m2-cA 173 82 0.3372 0.1676 0.3537 1.17e-11 1a45-a1-m1-cA_1a45-a1-m2-cA
5 1a45-a1-m1-cA 173 86 0.7442 0.3699 0.7442 4.38e-44 1a45-a1-m1-cA_1a45-a1-m2-cA
6 1a45-a1-m1-cA 173 82 0.3372 0.1676 0.3537 1.17e-11 1a45-a1-m1-cA_1a45-a1-m2-cA
7 4gr7-a3-m1-cX 173 86 0.7209 0.3584 0.7209 1.58e-42 4gr7-a3-m1-cA_4gr7-a3-m1-cX
8 4gr7-a3-m1-cX 173 82 0.3372 0.1676 0.3537 7.01e-10 4gr7-a3-m1-cA_4gr7-a3-m1-cX
9 4gr7-a3-m1-cA 173 86 0.7209 0.3584 0.7209 1.58e-42 4gr7-a3-m1-cA_4gr7-a3-m1-cX
10 4gr7-a3-m1-cA 173 82 0.3372 0.1676 0.3537 7.01e-10 4gr7-a3-m1-cA_4gr7-a3-m1-cX
11 6fd8-a1-m2-cB 174 85 0.5233 0.2586 0.5294 2.00e-32 6fd8-a1-m1-cA_6fd8-a1-m2-cB
12 6fd8-a1-m2-cB 174 82 0.3023 0.1494 0.3171 3.59e-11 6fd8-a1-m1-cA_6fd8-a1-m2-cB
13 6fd8-a1-m1-cA 174 85 0.5233 0.2586 0.5294 2.00e-32 6fd8-a1-m1-cA_6fd8-a1-m2-cB
14 6fd8-a1-m1-cA 174 82 0.3023 0.1494 0.3171 3.59e-11 6fd8-a1-m1-cA_6fd8-a1-m2-cB
15 1oki-a1-m1-cB 182 85 0.4070 0.1923 0.4118 1.59e-16 1oki-a1-m1-cA_1oki-a1-m1-cB
16 1oki-a1-m1-cB 182 73 0.2674 0.1264 0.3151 6.55e-08 1oki-a1-m1-cA_1oki-a1-m1-cB
17 1oki-a1-m1-cA 182 85 0.4070 0.1923 0.4118 1.59e-16 1oki-a1-m1-cA_1oki-a1-m1-cB
18 1oki-a1-m1-cA 182 73 0.2674 0.1264 0.3151 6.55e-08 1oki-a1-m1-cA_1oki-a1-m1-cB
19 1bd7-a1-m1-cB 171 85 0.3953 0.1988 0.4000 3.82e-15 1bd7-a1-m1-cB_1bd7-a1-m1-cA
20 1bd7-a1-m1-cB 171 69 0.2558 0.1287 0.3188 1.22e-09 1bd7-a1-m1-cB_1bd7-a1-m1-cA
21 1bd7-a1-m1-cA 176 85 0.3953 0.1932 0.4000 3.89e-15 1bd7-a1-m1-cB_1bd7-a1-m1-cA
22 1bd7-a1-m1-cA 176 69 0.2558 0.1250 0.3188 1.41e-09 1bd7-a1-m1-cB_1bd7-a1-m1-cA
23 1ytq-a3-m4-cA 181 85 0.3953 0.1878 0.4000 6.04e-15 1ytq-a3-m1-cA_1ytq-a3-m4-cA, 1ytq-a3-m2-cA_1ytq-a3-m4-cA, 1ytq-a3-m3-cA_1ytq-a3-m4-cA
24 1ytq-a3-m4-cA 181 69 0.2558 0.1215 0.3188 3.17e-09 1ytq-a3-m1-cA_1ytq-a3-m4-cA, 1ytq-a3-m2-cA_1ytq-a3-m4-cA, 1ytq-a3-m3-cA_1ytq-a3-m4-cA
25 1ytq-a3-m3-cA 181 85 0.3953 0.1878 0.4000 6.04e-15 1ytq-a3-m3-cA_1ytq-a3-m4-cA
26 1ytq-a3-m3-cA 181 69 0.2558 0.1215 0.3188 3.17e-09 1ytq-a3-m3-cA_1ytq-a3-m4-cA
27 1ytq-a3-m2-cA 181 85 0.3953 0.1878 0.4000 6.04e-15 1ytq-a3-m2-cA_1ytq-a3-m4-cA
28 1ytq-a3-m2-cA 181 69 0.2558 0.1215 0.3188 3.17e-09 1ytq-a3-m2-cA_1ytq-a3-m4-cA
29 1ytq-a3-m1-cA 181 85 0.3953 0.1878 0.4000 6.04e-15 1ytq-a3-m1-cA_1ytq-a3-m4-cA
30 1ytq-a3-m1-cA 181 69 0.2558 0.1215 0.3188 3.17e-09 1ytq-a3-m1-cA_1ytq-a3-m4-cA
31 3qk3-a1-m1-cC 176 83 0.3721 0.1818 0.3855 3.38e-14 3qk3-a1-m1-cB_3qk3-a1-m1-cC
32 3qk3-a1-m1-cC 176 71 0.3023 0.1477 0.3662 7.50e-13 3qk3-a1-m1-cB_3qk3-a1-m1-cC
33 3qk3-a1-m1-cB 176 83 0.3721 0.1818 0.3855 3.38e-14 3qk3-a1-m1-cB_3qk3-a1-m1-cC
34 3qk3-a1-m1-cB 176 71 0.3023 0.1477 0.3662 7.50e-13 3qk3-a1-m1-cB_3qk3-a1-m1-cC
35 3lwk-a1-m2-cA 182 72 0.3256 0.1538 0.3889 2.75e-13 3lwk-a1-m1-cA_3lwk-a1-m2-cA
36 3lwk-a1-m2-cA 182 87 0.3721 0.1758 0.3678 4.15e-12 3lwk-a1-m1-cA_3lwk-a1-m2-cA
37 3lwk-a1-m1-cA 182 72 0.3256 0.1538 0.3889 2.75e-13 3lwk-a1-m1-cA_3lwk-a1-m2-cA
38 3lwk-a1-m1-cA 182 87 0.3721 0.1758 0.3678 4.15e-12 3lwk-a1-m1-cA_3lwk-a1-m2-cA
39 5ht7-a1-m1-cC 82 49 0.1977 0.2073 0.3469 0.36 5ht7-a1-m1-cB_5ht7-a1-m1-cC
40 5ht7-a1-m1-cB 82 49 0.1977 0.2073 0.3469 0.36 5ht7-a1-m1-cB_5ht7-a1-m1-cC
41 1ig3-a3-m2-cB 243 59 0.1860 0.0658 0.2712 3.9 1ig3-a3-m2-cB_1ig3-a3-m2-cA
42 1ig3-a2-m4-cB 243 59 0.1860 0.0658 0.2712 3.9 1ig3-a2-m4-cB_1ig3-a2-m1-cA, 1ig3-a2-m4-cB_1ig3-a2-m2-cA
43 1ig3-a3-m2-cA 254 59 0.1860 0.0630 0.2712 4.0 1ig3-a3-m1-cA_1ig3-a3-m2-cA, 1ig3-a3-m2-cB_1ig3-a3-m2-cA
44 1ig3-a3-m1-cA 254 59 0.1860 0.0630 0.2712 4.0 1ig3-a3-m1-cA_1ig3-a3-m2-cA
45 1ig3-a2-m2-cA 254 59 0.1860 0.0630 0.2712 4.0 1ig3-a2-m4-cB_1ig3-a2-m2-cA
46 1ig3-a2-m1-cA 254 59 0.1860 0.0630 0.2712 4.0 1ig3-a2-m4-cB_1ig3-a2-m1-cA
47 3qan-a2-m2-cC 515 16 0.1047 0.0175 0.5625 9.1 3qan-a2-m1-cC_3qan-a2-m2-cC
48 3qan-a2-m1-cC 515 16 0.1047 0.0175 0.5625 9.1 3qan-a2-m1-cC_3qan-a2-m2-cC

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Reference:
Jacob Schwartz et al.

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