Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
TGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEERLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3p7j-a2-m2-cA 59 59 1.0000 1.0000 1.0000 2.23e-39 3p7j-a2-m2-cA_3p7j-a2-m1-cB
2 3p7j-a1-m1-cA 59 59 1.0000 1.0000 1.0000 2.23e-39 3p7j-a1-m1-cA_3p7j-a1-m1-cB
3 3p7j-a2-m1-cB 61 59 1.0000 0.9672 1.0000 2.56e-39 3p7j-a2-m2-cA_3p7j-a2-m1-cB
4 3p7j-a1-m1-cB 61 59 1.0000 0.9672 1.0000 2.56e-39 3p7j-a1-m1-cA_3p7j-a1-m1-cB
5 2fmm-a1-m2-cC 67 58 0.5424 0.4776 0.5517 7.88e-20 2fmm-a1-m2-cC_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cC
6 2fmm-a1-m2-cD 66 58 0.5424 0.4848 0.5517 8.48e-20 2fmm-a1-m2-cD_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cC
7 2fmm-a1-m2-cA 68 58 0.5424 0.4706 0.5517 8.64e-20 2fmm-a1-m2-cC_2fmm-a1-m2-cA, 2fmm-a1-m2-cD_2fmm-a1-m2-cA
8 3kup-a1-m1-cB 62 58 0.5085 0.4839 0.5172 1.77e-17 3kup-a1-m1-cA_3kup-a1-m1-cB
9 3kup-a1-m1-cA 59 57 0.5085 0.5085 0.5263 3.63e-17 3kup-a1-m1-cA_3kup-a1-m1-cB
10 5xyw-a1-m1-cA 54 54 0.3051 0.3333 0.3333 7.17e-05 5xyw-a1-m1-cB_5xyw-a1-m1-cA
11 5xyv-a1-m1-cA 63 54 0.2712 0.2540 0.2963 0.001 5xyv-a1-m1-cA_5xyv-a1-m1-cB
12 5xyv-a1-m1-cB 64 54 0.2712 0.2500 0.2963 0.002 5xyv-a1-m1-cA_5xyv-a1-m1-cB
13 4tva-a1-m2-cA 266 39 0.3051 0.0677 0.4615 2.7 4tva-a1-m1-cA_4tva-a1-m2-cA
14 4tva-a1-m1-cA 266 39 0.3051 0.0677 0.4615 2.7 4tva-a1-m1-cA_4tva-a1-m2-cA
15 3dm1-a5-m1-cC 52 45 0.1864 0.2115 0.2444 3.3 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cC_3dm1-a5-m1-cG
16 3dm1-a5-m1-cA 52 45 0.1864 0.2115 0.2444 3.3 3dm1-a5-m1-cA_3dm1-a5-m1-cG
17 3dm1-a5-m1-cG 53 45 0.1864 0.2075 0.2444 3.3 3dm1-a5-m1-cA_3dm1-a5-m1-cG, 3dm1-a5-m1-cC_3dm1-a5-m1-cG, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
18 3dm1-a5-m1-cE 53 45 0.1864 0.2075 0.2444 3.3 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
19 3usb-a3-m9-cA 428 52 0.3220 0.0444 0.3654 4.8 3usb-a3-m1-cB_3usb-a3-m9-cA, 3usb-a3-m11-cA_3usb-a3-m9-cA
20 3usb-a3-m11-cA 428 52 0.3220 0.0444 0.3654 4.8 3usb-a3-m11-cA_3usb-a3-m9-cA
21 4csw-a1-m1-cB 388 28 0.2034 0.0309 0.4286 7.0 4csw-a1-m1-cA_4csw-a1-m1-cB
22 4csw-a1-m1-cA 388 28 0.2034 0.0309 0.4286 7.0 4csw-a1-m1-cA_4csw-a1-m1-cB
23 3tsb-a1-m4-cA 490 52 0.3220 0.0388 0.3654 9.8 3tsb-a1-m2-cA_3tsb-a1-m4-cA
24 3tsb-a1-m2-cA 490 52 0.3220 0.0388 0.3654 9.8 3tsb-a1-m2-cA_3tsb-a1-m4-cA
25 3tsd-a2-m4-cB 426 52 0.3220 0.0446 0.3654 9.8 3tsd-a2-m2-cB_3tsd-a2-m4-cB
26 3tsd-a2-m2-cB 426 52 0.3220 0.0446 0.3654 9.8 3tsd-a2-m2-cB_3tsd-a2-m4-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600