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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=73)
TGKQLVIQESILMLPEEVEEVIGNKPESDILVHTAYDESTDENVMLLTSDAPEYKPWALV
IQDSNGENKIKML

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1lqg-a3-m1-cC 73 73 1.0000 1.0000 1.0000 1.89e-48 1lqg-a3-m2-cD_1lqg-a3-m1-cC
2 1lqg-a3-m2-cD 70 70 0.9589 1.0000 1.0000 7.64e-46 1lqg-a3-m2-cD_1lqg-a3-m1-cC
3 3dkq-a1-m2-cB 203 35 0.1781 0.0640 0.3714 0.83 3dkq-a1-m1-cB_3dkq-a1-m2-cB, 3dkq-a1-m2-cB_3dkq-a1-m2-cA, 3dkq-a1-m2-cB_3dkq-a1-m2-cC
4 3dkq-a1-m1-cB 203 35 0.1781 0.0640 0.3714 0.83 3dkq-a1-m1-cB_3dkq-a1-m2-cB
5 3dkq-a1-m2-cC 216 33 0.1781 0.0602 0.3939 1.2 3dkq-a1-m2-cB_3dkq-a1-m2-cC, 3dkq-a1-m2-cC_3dkq-a1-m2-cA
6 3dkq-a1-m2-cA 224 33 0.1781 0.0580 0.3939 1.2 3dkq-a1-m2-cB_3dkq-a1-m2-cA, 3dkq-a1-m2-cC_3dkq-a1-m2-cA
7 6z2x-a1-m1-cF 2325 21 0.1507 0.0047 0.5238 2.3 6z2x-a1-m1-cE_6z2x-a1-m1-cF
8 6z2x-a1-m1-cE 2325 21 0.1507 0.0047 0.5238 2.3 6z2x-a1-m1-cE_6z2x-a1-m1-cF
9 2qcv-a1-m4-cA 320 41 0.1644 0.0375 0.2927 8.5 2qcv-a1-m1-cA_2qcv-a1-m4-cA, 2qcv-a1-m3-cA_2qcv-a1-m4-cA
10 2qcv-a1-m3-cA 320 41 0.1644 0.0375 0.2927 8.5 2qcv-a1-m3-cA_2qcv-a1-m4-cA
11 2qcv-a1-m1-cA 320 41 0.1644 0.0375 0.2927 8.5 2qcv-a1-m1-cA_2qcv-a1-m4-cA
12 7n61-a1-m1-c1A 404 42 0.1781 0.0322 0.3095 8.6 7n61-a1-m1-c1A_7n61-a1-m1-c0Z
13 7n61-a1-m1-c0Z 420 42 0.1781 0.0310 0.3095 9.8 7n61-a1-m1-c1A_7n61-a1-m1-c0Z

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Reference:
Jacob Schwartz et al.

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