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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
TGPKQQPLPPDVEGREDAIEVLRAFVLDGGLSIAFRAFDPEWGLLLVDIARHAARSYARE
SEYTEDEALERIVEFEAELSR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ic3-a3-m1-cD 81 81 1.0000 1.0000 1.0000 1.62e-53 3ic3-a3-m1-cD_3ic3-a3-m1-cA, 3ic3-a3-m1-cD_3ic3-a3-m1-cB
2 3ic3-a3-m1-cA 94 82 1.0000 0.8617 0.9878 4.61e-52 3ic3-a3-m1-cB_3ic3-a3-m1-cA, 3ic3-a3-m1-cD_3ic3-a3-m1-cA
3 3ic3-a3-m1-cB 92 82 1.0000 0.8804 0.9878 5.34e-52 3ic3-a3-m1-cB_3ic3-a3-m1-cA, 3ic3-a3-m1-cD_3ic3-a3-m1-cB
4 3b20-a2-m1-cO 337 36 0.1852 0.0445 0.4167 0.65 3b20-a2-m1-cO_3b20-a2-m1-cR
5 3b20-a2-m1-cR 338 36 0.1852 0.0444 0.4167 0.65 3b20-a2-m1-cO_3b20-a2-m1-cR
6 3b20-a1-m2-cB 338 36 0.1852 0.0444 0.4167 0.65 3b20-a1-m2-cA_3b20-a1-m2-cB
7 3b20-a1-m2-cA 338 36 0.1852 0.0444 0.4167 0.65 3b20-a1-m2-cA_3b20-a1-m2-cB
8 3r5x-a2-m1-cD 292 29 0.1235 0.0342 0.3448 4.5 3r5x-a2-m1-cC_3r5x-a2-m1-cD
9 2d2i-a2-m1-cQ 338 33 0.1728 0.0414 0.4242 4.9 2d2i-a2-m1-cO_2d2i-a2-m1-cQ
10 2d2i-a2-m1-cO 338 33 0.1728 0.0414 0.4242 4.9 2d2i-a2-m1-cO_2d2i-a2-m1-cQ

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Reference:
Jacob Schwartz et al.

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