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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
THRVQIEYCTQCRWLPRAAWLAQELLTTFETELTELALKPGTGGVFVVRVDDEVVWDRRE
QGFPEPTAVKRLVRDRV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3dex-a4-m1-cG 77 77 1.0000 1.0000 1.0000 7.26e-52 3dex-a4-m1-cG_3dex-a4-m1-cH
2 3dex-a4-m1-cH 83 77 1.0000 0.9277 1.0000 8.67e-52 3dex-a4-m1-cG_3dex-a4-m1-cH
3 2oka-a1-m1-cD 84 75 0.5584 0.5119 0.5733 2.78e-25 2oka-a1-m1-cA_2oka-a1-m1-cD, 2oka-a1-m1-cC_2oka-a1-m1-cD
4 2oka-a1-m1-cC 84 75 0.5584 0.5119 0.5733 2.78e-25 2oka-a1-m1-cC_2oka-a1-m1-cD
5 2oka-a1-m1-cA 84 75 0.5584 0.5119 0.5733 2.78e-25 2oka-a1-m1-cA_2oka-a1-m1-cD
6 2ojl-a1-m2-cB 76 76 0.5455 0.5526 0.5526 1.09e-23 2ojl-a1-m2-cB_2ojl-a1-m1-cA, 2ojl-a1-m2-cB_2ojl-a1-m2-cA
7 2ojl-a1-m2-cA 78 76 0.5455 0.5385 0.5526 1.13e-23 2ojl-a1-m2-cB_2ojl-a1-m2-cA
8 2ojl-a1-m1-cA 78 76 0.5455 0.5385 0.5526 1.13e-23 2ojl-a1-m2-cB_2ojl-a1-m1-cA
9 2obk-a2-m1-cE 80 75 0.5065 0.4875 0.5200 5.07e-23 2obk-a2-m1-cE_2obk-a2-m1-cH
10 2obk-a2-m1-cH 83 75 0.5065 0.4699 0.5200 6.13e-23 2obk-a2-m1-cE_2obk-a2-m1-cH
11 2obk-a1-m1-cB 85 75 0.5065 0.4588 0.5200 7.06e-23 2obk-a1-m1-cA_2obk-a1-m1-cB
12 2obk-a1-m1-cA 84 75 0.5065 0.4643 0.5200 7.10e-23 2obk-a1-m1-cA_2obk-a1-m1-cB
13 2fa8-a1-m1-cC 80 76 0.4805 0.4625 0.4868 3.48e-22 2fa8-a1-m1-cC_2fa8-a1-m1-cB, 2fa8-a1-m1-cC_2fa8-a1-m1-cD
14 2fa8-a1-m1-cD 80 76 0.4805 0.4625 0.4868 3.52e-22 2fa8-a1-m1-cC_2fa8-a1-m1-cD
15 2fa8-a1-m1-cB 86 76 0.4805 0.4302 0.4868 5.15e-22 2fa8-a1-m1-cC_2fa8-a1-m1-cB
16 2p0g-a1-m1-cA 77 76 0.4675 0.4675 0.4737 5.58e-19 2p0g-a1-m1-cA_2p0g-a1-m1-cD
17 2p0g-a1-m1-cC 79 76 0.4675 0.4557 0.4737 5.81e-19 2p0g-a1-m1-cC_2p0g-a1-m1-cD
18 2p0g-a1-m1-cD 79 76 0.4675 0.4557 0.4737 7.90e-19 2p0g-a1-m1-cA_2p0g-a1-m1-cD, 2p0g-a1-m1-cC_2p0g-a1-m1-cD
19 7ey9-a1-m1-cx 792 30 0.1429 0.0139 0.3667 6.8 7ey9-a1-m1-cw_7ey9-a1-m1-cx
20 7ey9-a1-m1-cw 792 30 0.1429 0.0139 0.3667 6.8 7ey9-a1-m1-cw_7ey9-a1-m1-cx

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Reference:
Jacob Schwartz et al.

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