Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
TIAEPAMIAECKTRTEVFEISRRLIDRTNANFLVWPPCVEVQRCSGCCNNRNVQCRPTQV
QLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKCETV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3mjg-a2-m1-cB 101 97 1.0000 0.9604 1.0000 5.65e-67 3mjg-a2-m1-cA_3mjg-a2-m1-cB
2 3mjg-a2-m1-cA 97 97 1.0000 1.0000 1.0000 1.12e-66 3mjg-a2-m1-cA_3mjg-a2-m1-cB
3 1pdg-a2-m2-cC 86 96 0.8866 1.0000 0.8958 5.01e-55 1pdg-a2-m1-cC_1pdg-a2-m2-cC
4 1pdg-a2-m1-cC 86 96 0.8866 1.0000 0.8958 5.01e-55 1pdg-a2-m1-cC_1pdg-a2-m2-cC
5 3mjk-a3-m1-cY 129 93 0.5464 0.4109 0.5699 3.26e-34 3mjk-a3-m1-cX_3mjk-a3-m1-cY
6 3mjk-a3-m1-cX 121 93 0.5464 0.4380 0.5699 4.51e-34 3mjk-a3-m1-cX_3mjk-a3-m1-cY
7 2x1w-a1-m1-cA 98 86 0.2680 0.2653 0.3023 7.96e-09 2x1w-a1-m1-cA_2x1w-a1-m1-cB
8 2x1w-a1-m1-cB 98 86 0.2680 0.2653 0.3023 9.66e-09 2x1w-a1-m1-cA_2x1w-a1-m1-cB
9 2c7w-a1-m1-cB 95 86 0.3196 0.3263 0.3605 4.75e-08 2c7w-a1-m1-cA_2c7w-a1-m1-cB
10 2c7w-a1-m1-cA 95 86 0.3196 0.3263 0.3605 4.75e-08 2c7w-a1-m1-cA_2c7w-a1-m1-cB
11 2xv7-a1-m2-cA 104 86 0.2784 0.2596 0.3140 2.39e-07 2xv7-a1-m1-cA_2xv7-a1-m2-cA
12 2xv7-a1-m1-cA 104 86 0.2784 0.2596 0.3140 2.39e-07 2xv7-a1-m1-cA_2xv7-a1-m2-cA
13 3v6b-a1-m2-cA 94 51 0.2165 0.2234 0.4118 2.76e-06 3v6b-a1-m1-cA_3v6b-a1-m2-cA
14 3v6b-a1-m1-cA 94 51 0.2165 0.2234 0.4118 2.76e-06 3v6b-a1-m1-cA_3v6b-a1-m2-cA
15 1wq9-a1-m1-cB 95 86 0.2474 0.2526 0.2791 1.29e-05 1wq9-a1-m1-cB_1wq9-a1-m1-cA
16 1wq9-a1-m1-cA 96 86 0.2474 0.2500 0.2791 1.37e-05 1wq9-a1-m1-cB_1wq9-a1-m1-cA
17 1fzv-a1-m1-cB 100 77 0.2268 0.2200 0.2857 5.67e-05 1fzv-a1-m1-cA_1fzv-a1-m1-cB
18 1fzv-a1-m1-cA 100 77 0.2268 0.2200 0.2857 5.67e-05 1fzv-a1-m1-cA_1fzv-a1-m1-cB
19 1wq8-a2-m8-cA 99 86 0.2371 0.2323 0.2674 9.87e-05 1wq8-a2-m3-cA_1wq8-a2-m8-cA, 1wq8-a2-m5-cA_1wq8-a2-m8-cA
20 1wq8-a2-m5-cA 99 86 0.2371 0.2323 0.2674 9.87e-05 1wq8-a2-m5-cA_1wq8-a2-m8-cA
21 1wq8-a2-m3-cA 99 86 0.2371 0.2323 0.2674 9.87e-05 1wq8-a2-m3-cA_1wq8-a2-m8-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600