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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
TIKEDILKDFEEFKGYLKKQVNRGKKLGLDDGKLVKSAAILGDYLAKHEEPQNGEELLQE
LWSVADEDEKEHLAQLLVKLVDKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3d0w-a2-m1-cD 84 84 1.0000 1.0000 1.0000 2.70e-54 3d0w-a2-m1-cD_3d0w-a2-m1-cB
2 3d0w-a2-m1-cB 85 84 1.0000 0.9882 1.0000 3.39e-54 3d0w-a2-m1-cD_3d0w-a2-m1-cB
3 2fk6-a1-m2-cA 307 58 0.1667 0.0456 0.2414 0.86 2fk6-a1-m1-cA_2fk6-a1-m2-cA
4 2fk6-a1-m1-cA 307 58 0.1667 0.0456 0.2414 0.86 2fk6-a1-m1-cA_2fk6-a1-m2-cA
5 7a0n-a2-m1-cB 385 48 0.1905 0.0416 0.3333 1.3 7a0n-a2-m1-cB_7a0n-a2-m1-cA, 7a0n-a2-m1-cD_7a0n-a2-m1-cB
6 2wtg-a1-m2-cA 158 41 0.1190 0.0633 0.2439 3.7 2wtg-a1-m1-cA_2wtg-a1-m2-cA
7 2wtg-a1-m1-cA 158 41 0.1190 0.0633 0.2439 3.7 2wtg-a1-m1-cA_2wtg-a1-m2-cA
8 7a0n-a2-m1-cA 386 48 0.1905 0.0415 0.3333 5.3 7a0n-a2-m1-cB_7a0n-a2-m1-cA
9 7a0n-a2-m1-cD 379 48 0.1905 0.0422 0.3333 5.7 7a0n-a2-m1-cD_7a0n-a2-m1-cB
10 7d99-a1-m1-cB 891 53 0.1905 0.0180 0.3019 5.8 7d99-a1-m1-cA_7d99-a1-m1-cB
11 7d99-a1-m1-cA 891 53 0.1905 0.0180 0.3019 5.8 7d99-a1-m1-cA_7d99-a1-m1-cB
12 3hhg-a1-m1-cB 295 15 0.1190 0.0339 0.6667 9.5 3hhg-a1-m1-cC_3hhg-a1-m1-cB
13 3hhg-a1-m1-cC 294 15 0.1190 0.0340 0.6667 9.6 3hhg-a1-m1-cC_3hhg-a1-m1-cB
14 3hhf-a1-m1-cB 200 15 0.1190 0.0500 0.6667 10.0 3hhf-a1-m1-cB_3hhf-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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