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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
TKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGT
IP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vp3-a4-m1-cN 62 62 1.0000 1.0000 1.0000 3.27e-41 7vp3-a4-m1-cP_7vp3-a4-m1-cN
2 7vp3-a4-m1-cP 61 60 0.9677 0.9836 1.0000 1.52e-39 7vp3-a4-m1-cP_7vp3-a4-m1-cN
3 7vp2-a1-m1-cB 58 55 0.3065 0.3276 0.3455 3.01e-06 7vp2-a1-m1-cB_7vp2-a1-m1-cA
4 7vp2-a1-m1-cA 83 55 0.3065 0.2289 0.3455 6.99e-06 7vp2-a1-m1-cB_7vp2-a1-m1-cA
5 5zkt-a1-m1-cB 55 36 0.1935 0.2182 0.3333 0.005 5zkt-a1-m1-cA_5zkt-a1-m1-cB
6 5zkt-a1-m1-cA 54 36 0.1935 0.2222 0.3333 0.005 5zkt-a1-m1-cA_5zkt-a1-m1-cB
7 5k3i-a1-m1-cB 657 26 0.2258 0.0213 0.5385 0.023 5k3i-a1-m1-cB_5k3i-a1-m1-cA
8 5k3i-a1-m1-cA 661 26 0.2258 0.0212 0.5385 0.048 5k3i-a1-m1-cB_5k3i-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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