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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
TKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYC
RYQKCLAMGMKREAVQEERQR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6fbq-a1-m1-cB 81 81 1.0000 1.0000 1.0000 4.58e-55 6fbq-a1-m1-cA_6fbq-a1-m1-cB
2 6fbq-a1-m1-cA 80 79 0.9753 0.9875 1.0000 1.11e-53 6fbq-a1-m1-cA_6fbq-a1-m1-cB
3 7xv6-a1-m1-cA 84 76 0.6420 0.6190 0.6842 2.79e-37 7xv6-a1-m1-cB_7xv6-a1-m1-cA
4 7xv9-a1-m1-cB 80 73 0.6173 0.6250 0.6849 6.91e-36 7xv9-a1-m1-cA_7xv9-a1-m1-cB
5 7xv9-a1-m1-cA 80 73 0.6173 0.6250 0.6849 6.91e-36 7xv9-a1-m1-cA_7xv9-a1-m1-cB
6 7xv6-a1-m1-cB 77 73 0.6173 0.6494 0.6849 7.65e-36 7xv6-a1-m1-cB_7xv6-a1-m1-cA
7 6l6l-a1-m1-cA 85 75 0.5802 0.5529 0.6267 3.48e-32 6l6l-a1-m1-cB_6l6l-a1-m1-cA
8 6l6l-a1-m1-cB 84 75 0.5802 0.5595 0.6267 3.81e-32 6l6l-a1-m1-cB_6l6l-a1-m1-cA
9 8ifo-a1-m1-cB 80 79 0.4938 0.5000 0.5063 1.78e-25 8ifo-a1-m1-cA_8ifo-a1-m1-cB
10 8ifo-a1-m1-cA 76 75 0.4815 0.5132 0.5200 8.10e-25 8ifo-a1-m1-cA_8ifo-a1-m1-cB
11 4oln-a1-m1-cA 70 70 0.4691 0.5429 0.5429 1.06e-22 4oln-a1-m1-cB_4oln-a1-m1-cA
12 4oln-a1-m1-cB 67 69 0.4568 0.5522 0.5362 1.42e-21 4oln-a1-m1-cB_4oln-a1-m1-cA
13 1hcq-a2-m1-cE 74 68 0.4321 0.4730 0.5147 1.83e-20 1hcq-a2-m1-cF_1hcq-a2-m1-cE
14 1hcq-a2-m1-cF 71 68 0.4444 0.5070 0.5294 5.12e-20 1hcq-a2-m1-cF_1hcq-a2-m1-cE
15 2c7a-a1-m1-cB 76 70 0.4074 0.4342 0.4714 2.20e-17 2c7a-a1-m1-cB_2c7a-a1-m1-cA
16 2c7a-a1-m1-cA 78 70 0.4074 0.4231 0.4714 2.67e-17 2c7a-a1-m1-cB_2c7a-a1-m1-cA
17 1r4i-a1-m1-cA 74 74 0.4074 0.4459 0.4459 2.50e-16 1r4i-a1-m1-cB_1r4i-a1-m1-cA
18 1r4i-a1-m1-cB 71 66 0.3951 0.4507 0.4848 4.14e-16 1r4i-a1-m1-cB_1r4i-a1-m1-cA
19 2aus-a5-m3-cB 53 36 0.1235 0.1887 0.2778 1.1 2aus-a5-m1-cB_2aus-a5-m3-cB
20 2aus-a5-m1-cB 53 36 0.1235 0.1887 0.2778 1.1 2aus-a5-m1-cB_2aus-a5-m3-cB
21 2aus-a1-m2-cD 53 36 0.1235 0.1887 0.2778 1.1 2aus-a1-m1-cD_2aus-a1-m2-cD
22 2aus-a1-m1-cD 53 36 0.1235 0.1887 0.2778 1.1 2aus-a1-m1-cD_2aus-a1-m2-cD
23 2ey4-a3-m2-cF 52 36 0.1111 0.1731 0.2500 2.0 2ey4-a3-m1-cE_2ey4-a3-m2-cF
24 2ey4-a3-m1-cE 52 36 0.1111 0.1731 0.2500 2.0 2ey4-a3-m1-cE_2ey4-a3-m2-cF
25 4u77-a1-m2-cA 121 29 0.1358 0.0909 0.3793 2.3 4u77-a1-m1-cA_4u77-a1-m2-cA
26 4u77-a1-m1-cA 121 29 0.1358 0.0909 0.3793 2.3 4u77-a1-m1-cA_4u77-a1-m2-cA
27 3mw6-a4-m1-cF 113 40 0.1728 0.1239 0.3500 8.5 3mw6-a4-m1-cF_3mw6-a4-m1-cE
28 3mw6-a3-m3-cF 113 40 0.1728 0.1239 0.3500 8.5 3mw6-a3-m3-cF_3mw6-a3-m1-cD, 3mw6-a3-m3-cF_3mw6-a3-m2-cE
29 3mw6-a3-m1-cD 115 40 0.1728 0.1217 0.3500 8.9 3mw6-a3-m1-cD_3mw6-a3-m2-cE, 3mw6-a3-m3-cF_3mw6-a3-m1-cD
30 7uro-a1-m1-cC 1160 21 0.1358 0.0095 0.5238 9.8 7uro-a1-m1-cA_7uro-a1-m1-cC
31 7uro-a1-m1-cA 1160 21 0.1358 0.0095 0.5238 9.8 7uro-a1-m1-cA_7uro-a1-m1-cC
32 3mw6-a4-m1-cE 116 40 0.1728 0.1207 0.3500 9.8 3mw6-a4-m1-cF_3mw6-a4-m1-cE
33 3mw6-a3-m2-cE 116 40 0.1728 0.1207 0.3500 9.8 3mw6-a3-m1-cD_3mw6-a3-m2-cE, 3mw6-a3-m3-cF_3mw6-a3-m2-cE

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Reference:
Jacob Schwartz et al.

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