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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=54)
TKKERIAIQRSAEEALGKLKAIRQLCGAEDQEVEIWTNRIKELEDWLWGESPIA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2nr5-a3-m5-cB 54 54 1.0000 1.0000 1.0000 8.29e-33 2nr5-a3-m5-cB_2nr5-a3-m5-cC, 2nr5-a3-m5-cB_2nr5-a3-m5-cG
2 2nr5-a3-m5-cG 56 56 1.0000 0.9643 0.9643 4.91e-31 2nr5-a3-m5-cB_2nr5-a3-m5-cG
3 2nr5-a1-m1-cG 56 56 1.0000 0.9643 0.9643 4.91e-31 2nr5-a1-m1-cA_2nr5-a1-m1-cG
4 2nr5-a1-m1-cA 56 56 1.0000 0.9643 0.9643 6.53e-31 2nr5-a1-m1-cA_2nr5-a1-m1-cG
5 2nr5-a3-m5-cC 60 60 1.0000 0.9000 0.9000 1.35e-30 2nr5-a3-m5-cB_2nr5-a3-m5-cC
6 4wwu-a2-m1-cH 363 37 0.2222 0.0331 0.3243 0.28 4wwu-a2-m1-cE_4wwu-a2-m1-cH
7 4wwu-a2-m1-cE 349 37 0.2222 0.0344 0.3243 0.33 4wwu-a2-m1-cE_4wwu-a2-m1-cH
8 1tll-a1-m1-cB 616 24 0.1481 0.0130 0.3333 1.4 1tll-a1-m1-cB_1tll-a1-m1-cA
9 1tll-a1-m1-cA 630 24 0.1481 0.0127 0.3333 1.5 1tll-a1-m1-cB_1tll-a1-m1-cA
10 7dov-a1-m1-cC 148 37 0.2407 0.0878 0.3514 2.1 7dov-a1-m1-cA_7dov-a1-m1-cC
11 7dov-a1-m1-cA 148 37 0.2407 0.0878 0.3514 2.1 7dov-a1-m1-cA_7dov-a1-m1-cC
12 4pdx-a1-m1-cA 606 36 0.2222 0.0198 0.3333 2.5 4pdx-a1-m1-cB_4pdx-a1-m1-cA
13 4pdx-a1-m1-cB 603 36 0.2222 0.0199 0.3333 2.5 4pdx-a1-m1-cB_4pdx-a1-m1-cA
14 3ia7-a1-m1-cA 394 15 0.1852 0.0254 0.6667 4.8 3ia7-a1-m1-cB_3ia7-a1-m1-cA
15 3ia7-a1-m1-cB 382 15 0.1852 0.0262 0.6667 5.0 3ia7-a1-m1-cB_3ia7-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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