Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=54)
TKKERIAIQRSAEEALGKLKAIRQLCGAEDQEVEIWTNRIKELEDWLWGESPIA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2nr5-a3-m5-cB 54 54 1.0000 1.0000 1.0000 8.29e-33 2nr5-a3-m5-cB_2nr5-a3-m5-cC, 2nr5-a3-m5-cB_2nr5-a3-m5-cG
2 2nr5-a3-m5-cG 56 56 1.0000 0.9643 0.9643 4.91e-31 2nr5-a3-m5-cB_2nr5-a3-m5-cG
3 2nr5-a1-m1-cG 56 56 1.0000 0.9643 0.9643 4.91e-31 2nr5-a1-m1-cA_2nr5-a1-m1-cG
4 2nr5-a1-m1-cA 56 56 1.0000 0.9643 0.9643 6.53e-31 2nr5-a1-m1-cA_2nr5-a1-m1-cG
5 2nr5-a3-m5-cC 60 60 1.0000 0.9000 0.9000 1.35e-30 2nr5-a3-m5-cB_2nr5-a3-m5-cC
6 4wwu-a2-m1-cH 363 37 0.2222 0.0331 0.3243 0.28 4wwu-a2-m1-cE_4wwu-a2-m1-cH
7 4wwu-a2-m1-cE 349 37 0.2222 0.0344 0.3243 0.33 4wwu-a2-m1-cE_4wwu-a2-m1-cH
8 1tll-a1-m1-cB 616 24 0.1481 0.0130 0.3333 1.4 1tll-a1-m1-cB_1tll-a1-m1-cA
9 1tll-a1-m1-cA 630 24 0.1481 0.0127 0.3333 1.5 1tll-a1-m1-cB_1tll-a1-m1-cA
10 7dov-a1-m1-cC 148 37 0.2407 0.0878 0.3514 2.1 7dov-a1-m1-cA_7dov-a1-m1-cC
11 7dov-a1-m1-cA 148 37 0.2407 0.0878 0.3514 2.1 7dov-a1-m1-cA_7dov-a1-m1-cC
12 4pdx-a1-m1-cA 606 36 0.2222 0.0198 0.3333 2.5 4pdx-a1-m1-cB_4pdx-a1-m1-cA
13 4pdx-a1-m1-cB 603 36 0.2222 0.0199 0.3333 2.5 4pdx-a1-m1-cB_4pdx-a1-m1-cA
14 3ia7-a1-m1-cA 394 15 0.1852 0.0254 0.6667 4.8 3ia7-a1-m1-cB_3ia7-a1-m1-cA
15 3ia7-a1-m1-cB 382 15 0.1852 0.0262 0.6667 5.0 3ia7-a1-m1-cB_3ia7-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600