Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
TKTAQIAQQHKDTVAACEAAEAIAIAKDQVWDGEGYTKYTFDDNSVLIQSGTTQYADADD
ADSIKGYADWLDDEARSAEASEIERLLESV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5yhr-a3-m1-cB 90 90 1.0000 1.0000 1.0000 5.48e-60 5yhr-a3-m1-cA_5yhr-a3-m1-cB
2 5yhr-a3-m1-cA 90 90 1.0000 1.0000 1.0000 5.48e-60 5yhr-a3-m1-cA_5yhr-a3-m1-cB
3 3g3s-a2-m1-cB 245 25 0.0889 0.0327 0.3200 1.1 3g3s-a2-m1-cA_3g3s-a2-m1-cB
4 3g3s-a2-m1-cA 245 25 0.0889 0.0327 0.3200 1.1 3g3s-a2-m1-cA_3g3s-a2-m1-cB
5 3ty5-a1-m1-cA 381 55 0.2000 0.0472 0.3273 3.5 3ty5-a1-m1-cA_3ty5-a1-m1-cB
6 3ty9-a3-m1-cB 374 55 0.2000 0.0481 0.3273 3.7 3ty9-a3-m1-cB_3ty9-a3-m3-cD
7 3ty5-a1-m1-cB 381 55 0.2000 0.0472 0.3273 3.9 3ty5-a1-m1-cA_3ty5-a1-m1-cB
8 3ty9-a4-m1-cC 376 55 0.2000 0.0479 0.3273 4.0 3ty9-a4-m1-cD_3ty9-a4-m1-cC
9 3ty9-a4-m1-cD 374 55 0.2000 0.0481 0.3273 4.1 3ty9-a4-m1-cD_3ty9-a4-m1-cC
10 3ty9-a3-m3-cD 374 55 0.2000 0.0481 0.3273 4.1 3ty9-a3-m1-cB_3ty9-a3-m3-cD
11 6g9c-a1-m1-cB 368 62 0.1778 0.0435 0.2581 4.2 6g9c-a1-m1-cA_6g9c-a1-m1-cB
12 6g9c-a1-m1-cA 368 62 0.1778 0.0435 0.2581 4.2 6g9c-a1-m1-cA_6g9c-a1-m1-cB
13 4y5u-a1-m1-cA 444 30 0.1111 0.0225 0.3333 5.1 4y5u-a1-m1-cB_4y5u-a1-m1-cA
14 5l07-a2-m2-cB 159 58 0.1778 0.1006 0.2759 9.8 5l07-a2-m2-cA_5l07-a2-m2-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600