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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
TKTNIQKDWEQREFIEDMSINIQKIVEFLNKFELSTRNKLSDLNEKLTILDRQVDYLEAT
FKT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3pp5-a1-m3-cA 63 63 1.0000 1.0000 1.0000 8.75e-40 3pp5-a1-m2-cA_3pp5-a1-m3-cA
2 3pp5-a1-m2-cA 63 63 1.0000 1.0000 1.0000 8.75e-40 3pp5-a1-m2-cA_3pp5-a1-m3-cA
3 3r2p-a1-m2-cA 180 44 0.2063 0.0722 0.2955 0.71 3r2p-a1-m1-cA_3r2p-a1-m2-cA
4 3r2p-a1-m1-cA 180 44 0.2063 0.0722 0.2955 0.71 3r2p-a1-m1-cA_3r2p-a1-m2-cA
5 7bx9-a1-m4-cA 168 28 0.1746 0.0655 0.3929 0.89 7bx9-a1-m1-cA_7bx9-a1-m4-cA, 7bx9-a1-m2-cA_7bx9-a1-m4-cA, 7bx9-a1-m3-cA_7bx9-a1-m4-cA
6 7bx9-a1-m3-cA 168 28 0.1746 0.0655 0.3929 0.89 7bx9-a1-m3-cA_7bx9-a1-m4-cA
7 7bx9-a1-m2-cA 168 28 0.1746 0.0655 0.3929 0.89 7bx9-a1-m2-cA_7bx9-a1-m4-cA
8 7bx9-a1-m1-cA 168 28 0.1746 0.0655 0.3929 0.89 7bx9-a1-m1-cA_7bx9-a1-m4-cA
9 2gam-a1-m1-cB 359 45 0.2698 0.0474 0.3778 2.5 2gam-a1-m1-cB_2gam-a1-m1-cA
10 2gam-a1-m1-cA 365 45 0.2698 0.0466 0.3778 2.8 2gam-a1-m1-cB_2gam-a1-m1-cA
11 6ed1-a2-m1-cC 860 24 0.1905 0.0140 0.5000 4.0 6ed1-a2-m1-cB_6ed1-a2-m1-cC
12 6ed1-a2-m1-cB 860 24 0.1905 0.0140 0.5000 4.0 6ed1-a2-m1-cB_6ed1-a2-m1-cC
13 6yqf-a2-m2-cB 90 36 0.2222 0.1556 0.3889 7.4 6yqf-a2-m1-cB_6yqf-a2-m2-cB, 6yqf-a2-m2-cB_6yqf-a2-m1-cA, 6yqf-a2-m2-cB_6yqf-a2-m2-cA
14 6yqf-a2-m1-cB 90 36 0.2222 0.1556 0.3889 7.4 6yqf-a2-m1-cB_6yqf-a2-m2-cB
15 6yqf-a2-m2-cA 94 36 0.2222 0.1489 0.3889 8.5 6yqf-a2-m2-cB_6yqf-a2-m2-cA
16 6yqf-a2-m1-cA 94 36 0.2222 0.1489 0.3889 8.5 6yqf-a2-m2-cB_6yqf-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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