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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
TMKFMAENRLTLTKGTAKDIIERFYTRHGIETLEGFDGMFVTQTLEQEDFDEVKILTVWK
SKQAFTDWLKSDVFKAAHKSPIINNKVITYDIGYSYMK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1xbw-a2-m1-cD 98 98 1.0000 1.0000 1.0000 1.29e-69 1xbw-a2-m1-cC_1xbw-a2-m1-cD
2 2zdo-a2-m1-cC 108 108 0.9898 0.8981 0.8981 1.64e-65 2zdo-a2-m1-cC_2zdo-a2-m1-cD
3 2zdo-a2-m1-cD 109 108 0.9898 0.8899 0.8981 1.70e-65 2zdo-a2-m1-cC_2zdo-a2-m1-cD
4 1xbw-a2-m1-cC 90 98 0.9184 1.0000 0.9184 2.02e-60 1xbw-a2-m1-cC_1xbw-a2-m1-cD
5 3lgn-a1-m1-cA 110 107 0.6633 0.5909 0.6075 4.98e-42 3lgn-a1-m1-cB_3lgn-a1-m1-cA
6 3lgn-a1-m1-cB 109 107 0.6633 0.5963 0.6075 5.33e-42 3lgn-a1-m1-cB_3lgn-a1-m1-cA
7 1tz0-a1-m1-cA 106 77 0.2245 0.2075 0.2857 3.19e-04 1tz0-a1-m1-cC_1tz0-a1-m1-cA
8 1iuj-a2-m2-cA 102 76 0.2143 0.2059 0.2763 7.96e-04 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
9 1iuj-a2-m1-cA 102 76 0.2143 0.2059 0.2763 7.96e-04 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m1-cA_1iuj-a2-m2-cB
10 1iuj-a2-m2-cB 103 76 0.2143 0.2039 0.2763 8.34e-04 1iuj-a2-m1-cA_1iuj-a2-m2-cB, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
11 5uq4-a1-m1-cB 90 78 0.1939 0.2111 0.2436 0.003 5uq4-a1-m1-cA_5uq4-a1-m1-cB
12 5uq4-a1-m1-cA 86 77 0.1939 0.2209 0.2468 0.003 5uq4-a1-m1-cA_5uq4-a1-m1-cB
13 6ple-a1-m1-cB 96 70 0.1735 0.1771 0.2429 0.004 6ple-a1-m1-cA_6ple-a1-m1-cB
14 6ple-a1-m1-cA 96 70 0.1735 0.1771 0.2429 0.004 6ple-a1-m1-cA_6ple-a1-m1-cB
15 6ds7-a1-m1-cB 99 74 0.1939 0.1919 0.2568 0.004 6ds7-a1-m1-cA_6ds7-a1-m1-cB
16 6ds7-a1-m1-cA 99 74 0.1939 0.1919 0.2568 0.004 6ds7-a1-m1-cA_6ds7-a1-m1-cB
17 4nl5-a2-m2-cB 100 74 0.2041 0.2000 0.2703 0.004 4nl5-a2-m2-cB_4nl5-a2-m1-cA
18 4nl5-a2-m1-cA 101 74 0.2041 0.1980 0.2703 0.004 4nl5-a2-m2-cB_4nl5-a2-m1-cA
19 1tz0-a1-m1-cC 99 95 0.2551 0.2525 0.2632 0.008 1tz0-a1-m1-cC_1tz0-a1-m1-cA
20 3l77-a1-m4-cA 234 43 0.1531 0.0641 0.3488 0.39 3l77-a1-m2-cA_3l77-a1-m4-cA, 3l77-a1-m3-cA_3l77-a1-m4-cA
21 3l77-a1-m3-cA 234 43 0.1531 0.0641 0.3488 0.39 3l77-a1-m3-cA_3l77-a1-m4-cA
22 3l77-a1-m2-cA 234 43 0.1531 0.0641 0.3488 0.39 3l77-a1-m2-cA_3l77-a1-m4-cA
23 4ae4-a1-m1-cB 106 38 0.1327 0.1226 0.3421 1.7 4ae4-a1-m1-cA_4ae4-a1-m1-cB
24 4ae4-a1-m1-cA 105 38 0.1327 0.1238 0.3421 1.8 4ae4-a1-m1-cA_4ae4-a1-m1-cB
25 1iwp-a1-m1-cL 555 28 0.1020 0.0180 0.3571 3.8 1iwp-a1-m1-cA_1iwp-a1-m1-cL
26 1iwp-a1-m1-cA 555 28 0.1020 0.0180 0.3571 3.8 1iwp-a1-m1-cA_1iwp-a1-m1-cL
27 2g7z-a3-m2-cB 268 32 0.1327 0.0485 0.4062 4.6 2g7z-a3-m1-cA_2g7z-a3-m2-cB
28 2g7z-a3-m1-cA 268 32 0.1327 0.0485 0.4062 4.6 2g7z-a3-m1-cA_2g7z-a3-m2-cB
29 7jp2-a1-m1-cB 331 35 0.1327 0.0393 0.3714 8.0 7jp2-a1-m1-cA_7jp2-a1-m1-cB
30 7jp2-a1-m1-cA 330 35 0.1327 0.0394 0.3714 8.0 7jp2-a1-m1-cA_7jp2-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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