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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
TMKFMAENRLTLTKGTAKDIIERFYTRHGIETLEGFDGMFVTQTLEQEDFDEVKILTVWK
SKQAFTDWLKSSPIINNKVITYDIGYSYMK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1xbw-a2-m1-cC 90 90 1.0000 1.0000 1.0000 2.97e-63 1xbw-a2-m1-cC_1xbw-a2-m1-cD
2 1xbw-a2-m1-cD 98 98 1.0000 0.9184 0.9184 1.86e-60 1xbw-a2-m1-cC_1xbw-a2-m1-cD
3 2zdo-a2-m1-cD 109 108 0.9889 0.8165 0.8241 4.14e-58 2zdo-a2-m1-cC_2zdo-a2-m1-cD
4 2zdo-a2-m1-cC 108 108 0.9889 0.8241 0.8241 5.39e-58 2zdo-a2-m1-cC_2zdo-a2-m1-cD
5 3lgn-a1-m1-cB 109 107 0.6444 0.5321 0.5421 4.36e-35 3lgn-a1-m1-cB_3lgn-a1-m1-cA
6 3lgn-a1-m1-cA 110 107 0.6444 0.5273 0.5421 4.44e-35 3lgn-a1-m1-cB_3lgn-a1-m1-cA
7 5uq4-a1-m1-cB 90 85 0.2111 0.2111 0.2235 2.00e-04 5uq4-a1-m1-cA_5uq4-a1-m1-cB
8 5uq4-a1-m1-cA 86 84 0.2222 0.2326 0.2381 5.53e-04 5uq4-a1-m1-cA_5uq4-a1-m1-cB
9 6ple-a1-m1-cB 96 80 0.2111 0.1979 0.2375 0.004 6ple-a1-m1-cA_6ple-a1-m1-cB
10 6ple-a1-m1-cA 96 80 0.2111 0.1979 0.2375 0.004 6ple-a1-m1-cA_6ple-a1-m1-cB
11 6ds7-a1-m1-cB 99 80 0.2111 0.1919 0.2375 0.005 6ds7-a1-m1-cA_6ds7-a1-m1-cB
12 6ds7-a1-m1-cA 99 80 0.2111 0.1919 0.2375 0.005 6ds7-a1-m1-cA_6ds7-a1-m1-cB
13 4nl5-a2-m2-cB 100 80 0.2222 0.2000 0.2500 0.005 4nl5-a2-m2-cB_4nl5-a2-m1-cA
14 4nl5-a2-m1-cA 101 80 0.2222 0.1980 0.2500 0.005 4nl5-a2-m2-cB_4nl5-a2-m1-cA
15 1tz0-a1-m1-cC 99 91 0.2667 0.2424 0.2637 0.012 1tz0-a1-m1-cC_1tz0-a1-m1-cA
16 1tz0-a1-m1-cA 106 68 0.2222 0.1887 0.2941 0.021 1tz0-a1-m1-cC_1tz0-a1-m1-cA
17 1iuj-a2-m2-cA 102 70 0.2000 0.1765 0.2571 0.31 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
18 1iuj-a2-m1-cA 102 70 0.2000 0.1765 0.2571 0.31 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m1-cA_1iuj-a2-m2-cB
19 1iuj-a2-m2-cB 103 70 0.2000 0.1748 0.2571 0.34 1iuj-a2-m1-cA_1iuj-a2-m2-cB, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
20 3hn0-a1-m1-cA 277 17 0.1111 0.0361 0.5882 0.51 3hn0-a1-m1-cA_3hn0-a1-m1-cB
21 3hn0-a1-m1-cB 277 17 0.1111 0.0361 0.5882 0.51 3hn0-a1-m1-cA_3hn0-a1-m1-cB
22 4ae4-a1-m1-cA 105 38 0.1444 0.1238 0.3421 1.4 4ae4-a1-m1-cA_4ae4-a1-m1-cB
23 4ae4-a1-m1-cB 106 38 0.1444 0.1226 0.3421 1.4 4ae4-a1-m1-cA_4ae4-a1-m1-cB
24 3l77-a1-m4-cA 234 43 0.1556 0.0598 0.3256 2.4 3l77-a1-m2-cA_3l77-a1-m4-cA, 3l77-a1-m3-cA_3l77-a1-m4-cA
25 3l77-a1-m3-cA 234 43 0.1556 0.0598 0.3256 2.4 3l77-a1-m3-cA_3l77-a1-m4-cA
26 3l77-a1-m2-cA 234 43 0.1556 0.0598 0.3256 2.4 3l77-a1-m2-cA_3l77-a1-m4-cA
27 1iwp-a1-m1-cL 555 28 0.1111 0.0180 0.3571 3.3 1iwp-a1-m1-cA_1iwp-a1-m1-cL
28 1iwp-a1-m1-cA 555 28 0.1111 0.0180 0.3571 3.3 1iwp-a1-m1-cA_1iwp-a1-m1-cL
29 7jp2-a1-m1-cA 330 35 0.1444 0.0394 0.3714 6.3 7jp2-a1-m1-cA_7jp2-a1-m1-cB
30 3w08-a1-m1-cB 351 34 0.1000 0.0256 0.2647 6.4 3w08-a1-m1-cA_3w08-a1-m1-cB
31 3w08-a1-m1-cA 351 34 0.1000 0.0256 0.2647 6.4 3w08-a1-m1-cA_3w08-a1-m1-cB
32 7jp2-a1-m1-cB 331 35 0.1444 0.0393 0.3714 6.4 7jp2-a1-m1-cA_7jp2-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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