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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
TMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5y5s-a1-m1-cY 57 57 1.0000 1.0000 1.0000 2.46e-35 5y5s-a1-m1-c1_5y5s-a1-m1-cY
2 5y5s-a1-m1-c1 56 56 0.9825 1.0000 1.0000 1.61e-34 5y5s-a1-m1-c1_5y5s-a1-m1-cY
3 5y5s-a1-m1-cD 55 55 0.9649 1.0000 1.0000 1.16e-33 5y5s-a1-m1-cA_5y5s-a1-m1-cD
4 5y5s-a1-m1-cA 54 54 0.9474 1.0000 1.0000 8.35e-33 5y5s-a1-m1-cA_5y5s-a1-m1-cD
5 7vrj-a1-m1-cW 55 51 0.5088 0.5273 0.5686 3.15e-16 7vrj-a1-m1-cW_7vrj-a1-m1-cY
6 7vrj-a1-m1-cY 62 51 0.5088 0.4677 0.5686 3.30e-16 7vrj-a1-m1-cW_7vrj-a1-m1-cY
7 7vrj-a1-m1-cK 43 43 0.4211 0.5581 0.5581 2.46e-10 7vrj-a1-m1-cI_7vrj-a1-m1-cK
8 7vrj-a1-m1-cI 43 43 0.4211 0.5581 0.5581 2.46e-10 7vrj-a1-m1-cI_7vrj-a1-m1-cK
9 7ddq-a1-m1-cg 53 44 0.3860 0.4151 0.5000 3.35e-09 7ddq-a1-m1-cf_7ddq-a1-m1-cg
10 7ddq-a1-m1-cf 53 44 0.3860 0.4151 0.5000 3.35e-09 7ddq-a1-m1-cf_7ddq-a1-m1-cg
11 7pbw-a1-m1-cAI 49 48 0.2632 0.3061 0.3125 1.0 7pbw-a1-m1-cAH_7pbw-a1-m1-cAI
12 7pbw-a1-m1-cAH 49 48 0.2632 0.3061 0.3125 1.0 7pbw-a1-m1-cAH_7pbw-a1-m1-cAI
13 3hpa-a3-m1-cB 428 19 0.1754 0.0234 0.5263 8.5 3hpa-a3-m1-cA_3hpa-a3-m1-cB
14 3hpa-a3-m1-cA 428 19 0.1754 0.0234 0.5263 8.5 3hpa-a3-m1-cA_3hpa-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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