Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=57)
TMNANLYKIWLILDPRRVLVSIVAFQIVLGLLIHMIVLSTDLNWLDDNIPVSYQALG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5y5s-a1-m1-cY 57 57 1.0000 1.0000 1.0000 2.46e-35 5y5s-a1-m1-c1_5y5s-a1-m1-cY
2 5y5s-a1-m1-c1 56 56 0.9825 1.0000 1.0000 1.61e-34 5y5s-a1-m1-c1_5y5s-a1-m1-cY
3 5y5s-a1-m1-cD 55 55 0.9649 1.0000 1.0000 1.16e-33 5y5s-a1-m1-cA_5y5s-a1-m1-cD
4 5y5s-a1-m1-cA 54 54 0.9474 1.0000 1.0000 8.35e-33 5y5s-a1-m1-cA_5y5s-a1-m1-cD
5 7vrj-a1-m1-cW 55 51 0.5088 0.5273 0.5686 3.15e-16 7vrj-a1-m1-cW_7vrj-a1-m1-cY
6 7vrj-a1-m1-cY 62 51 0.5088 0.4677 0.5686 3.30e-16 7vrj-a1-m1-cW_7vrj-a1-m1-cY
7 7vrj-a1-m1-cK 43 43 0.4211 0.5581 0.5581 2.46e-10 7vrj-a1-m1-cI_7vrj-a1-m1-cK
8 7vrj-a1-m1-cI 43 43 0.4211 0.5581 0.5581 2.46e-10 7vrj-a1-m1-cI_7vrj-a1-m1-cK
9 7ddq-a1-m1-cg 53 44 0.3860 0.4151 0.5000 3.35e-09 7ddq-a1-m1-cf_7ddq-a1-m1-cg
10 7ddq-a1-m1-cf 53 44 0.3860 0.4151 0.5000 3.35e-09 7ddq-a1-m1-cf_7ddq-a1-m1-cg
11 7pbw-a1-m1-cAI 49 48 0.2632 0.3061 0.3125 1.0 7pbw-a1-m1-cAH_7pbw-a1-m1-cAI
12 7pbw-a1-m1-cAH 49 48 0.2632 0.3061 0.3125 1.0 7pbw-a1-m1-cAH_7pbw-a1-m1-cAI
13 3hpa-a3-m1-cB 428 19 0.1754 0.0234 0.5263 8.5 3hpa-a3-m1-cA_3hpa-a3-m1-cB
14 3hpa-a3-m1-cA 428 19 0.1754 0.0234 0.5263 8.5 3hpa-a3-m1-cA_3hpa-a3-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600