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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
TMRSEIQQLKTSVAVMEANLGMMKILDPGCANVSSLSDLRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7yov-a1-m1-cD 76 41 1.0000 0.5395 1.0000 2.32e-24 7yov-a1-m1-cD_7yov-a1-m1-cE
2 7you-a1-m1-cC 47 41 1.0000 0.8723 1.0000 2.64e-24 7you-a1-m1-cB_7you-a1-m1-cC
3 7you-a1-m1-cB 41 41 1.0000 1.0000 1.0000 2.97e-24 7you-a1-m1-cB_7you-a1-m1-cC, 7you-a1-m1-cB_7you-a1-m1-cD
4 7you-a1-m1-cD 54 41 1.0000 0.7593 1.0000 2.97e-24 7you-a1-m1-cB_7you-a1-m1-cD
5 7yot-a1-m1-cD 51 40 0.9756 0.7843 1.0000 1.62e-23 7yot-a1-m1-cC_7yot-a1-m1-cD
6 7yov-a1-m1-cE 158 41 1.0000 0.2595 1.0000 1.81e-23 7yov-a1-m1-cD_7yov-a1-m1-cE
7 7yot-a1-m1-cC 42 38 0.9268 0.9048 1.0000 6.18e-22 7yot-a1-m1-cC_7yot-a1-m1-cD
8 1sh5-a1-m1-cB 232 26 0.1951 0.0345 0.3077 3.7 1sh5-a1-m1-cA_1sh5-a1-m1-cB
9 1sh5-a1-m1-cA 232 26 0.1951 0.0345 0.3077 3.7 1sh5-a1-m1-cA_1sh5-a1-m1-cB
10 1qag-a3-m1-cB 221 27 0.2195 0.0407 0.3333 7.2 1qag-a3-m1-cA_1qag-a3-m1-cB
11 1qag-a3-m1-cA 221 27 0.2195 0.0407 0.3333 7.2 1qag-a3-m1-cA_1qag-a3-m1-cB
12 7cpy-a1-m1-cB 2262 11 0.1951 0.0035 0.7273 9.7 7cpy-a1-m1-cA_7cpy-a1-m1-cB
13 7cpy-a1-m1-cA 2262 11 0.1951 0.0035 0.7273 9.7 7cpy-a1-m1-cA_7cpy-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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